← Back to the gene family browser
This orthogroup contains 185 genes from 135 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 185 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10544 | 60S RIBOSOMAL PROTEIN L28 | 161 / 185 | 87.0% | 100.0% of 161 | ≥80% support |
| Pfam | PF01778 | Ribosomal_L28e — Ribosomal L28e protein family | 163 / 185 | 88.1% | 100.0% of 163 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 161 / 185 | 87.0% | 100.0% of 161 | ≥80% support |
| GO | GO:0005840 Cellular Component | ribosome | 161 / 185 | 87.0% | 100.0% of 161 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 161 / 185 | 87.0% | 100.0% of 161 | ≥80% support |
| GO | GO:0022625 Cellular Component | cytosolic large ribosomal subunit | 161 / 185 | 87.0% | 100.0% of 161 | ≥80% support |
| KEGG | K02903 | RP-L28e, RPL28 — Ribosome | 162 / 185 | 87.6% | 100.0% of 162 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0100.g17.t1 | XP_015757710.1 | PREDICTED: 60S ribosomal protein L28-like [Acropora digitifera] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Aurelia aurita | scaffold22.g113.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold530.g20.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000000800.1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Acropora awi | aawi_s0010.g35.t1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Acropora cervicornis | KAK2559267.1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Acropora cytherea | acyt_s0019.g87.t1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Acropora cytherea | acyt_s3028.g1.t1 | XP_015757710.1 | PREDICTED: 60S ribosomal protein L28-like [Acropora digitifera] | Q3T0L7 Large ribosomal subunit protein eL28 OS=Bos taurus OX=9913 G | JBrowse |
| Acropora digitifera | chr2Alt.g3617.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0006.g117.t1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Actinia equina | EGACTEQ4350018791-PA | XP_031558531.1 | 60S ribosomal protein L28-like [Actinia tenebrosa] | P46779 Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 | JBrowse |
| Actinia equina | EGACTEQ4350018791-PB | XP_031558531.1 | 60S ribosomal protein L28-like [Actinia tenebrosa] | P46779 Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 | JBrowse |
| Acropora florida | aflo_s0008.g113.t1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Acropora gemmifera | agem_s0001.g39.t1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Acropora hemprichii | Ahemp_007296-T2 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Acropora hemprichii | Ahemp_027131-T1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | – | JBrowse |
| Acropora hyacinthus | ahya_s0202.g28.t1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g13753 | XP_020915678.1 | 60S ribosomal protein L28 [Exaiptasia diaphana] | P46779 Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 | JBrowse |
| Acropora intermedia | aint_s0310.g22.t1 | XP_029198393.1 | 60S ribosomal protein L28-like [Acropora millepora] | P17702 Large ribosomal subunit protein eL28 OS=Rattus norvegicus OX | JBrowse |
| Actinoscyphia liui | gene15226.t1 | XP_020915678.1 | 60S ribosomal protein L28 [Exaiptasia diaphana] | P46779 Large ribosomal subunit protein eL28 OS=Homo sapiens OX=9606 | JBrowse |
