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This orthogroup contains 175 genes from 129 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 175 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22890 | UNCHARACTERIZED | 155 / 175 | 88.6% | 98.7% of 157 | ≥80% support |
| Pfam | PF10280 | Med11 — Mediator complex protein | 156 / 175 | 89.1% | 100.0% of 156 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 158 / 175 | 90.3% | 100.0% of 158 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 158 / 175 | 90.3% | 100.0% of 158 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 158 / 175 | 90.3% | 100.0% of 158 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0061.g132.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Alatina alata | Aala_g1129.t1 | GFN81373.1 | retrovirus-related pol polyprotein from type-1 retrotransposable element r2 [Plakobranchus ocellatus] | P08548 LINE-1 reverse transcriptase homolog OS=Nycticebus coucang O | JBrowse |
| Acropora austera | ENSKKQP00000020904.1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q9VVS4 Mediator of RNA polymerase II transcription subunit 11 OS=Dr | JBrowse |
| Acropora austera | ENSKKQP00000020913.1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q9VVS4 Mediator of RNA polymerase II transcription subunit 11 OS=Dr | JBrowse |
| Acropora awi | aawi_s0186.g14.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora cervicornis | KAK2557204.1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora cytherea | acyt_s0179.g45.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora digitifera | chr13Alt.g27137.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0052.g141.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Actinia equina | EGACTEQ4350019679-PA | XP_031563294.1 | mediator of RNA polymerase II transcription subunit 11-like [Actinia tenebrosa] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora florida | aflo_s0365.g15.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora gemmifera | agem_s0070.g14.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora hemprichii | Ahemp_015733-T1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora hyacinthus | ahya_s0338.g4.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g9177 | XP_031563294.1 | mediator of RNA polymerase II transcription subunit 11-like [Actinia tenebrosa] | A3KNK7 Mediator of RNA polymerase II transcription subunit 11 OS=Da | JBrowse |
| Acropora intermedia | aint_s0270.g21.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora loripes | alor_g10113.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q17NH9 Mediator of RNA polymerase II transcription subunit 11 OS=Ae | JBrowse |
| Actinia mediterranea | ENSQPTP00000013624.1 | XP_031563294.1 | mediator of RNA polymerase II transcription subunit 11-like [Actinia tenebrosa] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Actinia mediterranea | ENSQPTP00000054735.1 | XP_031563294.1 | mediator of RNA polymerase II transcription subunit 11-like [Actinia tenebrosa] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
| Acropora microphthalma | amic_s0005.g61.t1 | XP_015778061.1 | PREDICTED: mediator of RNA polymerase II transcription subunit 11-like [Acropora digitifera] | Q6P255 Mediator of RNA polymerase II transcription subunit 11 OS=Xe | JBrowse |
