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This orthogroup contains 172 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 172 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15302 | E3 UBIQUITIN-PROTEIN LIGASE RNF103 | 150 / 172 | 87.2% | 100.0% of 150 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 150 / 172 | 87.2% | 100.0% of 150 | ≥80% support |
| GO | GO:0005783 Cellular Component | endoplasmic reticulum | 150 / 172 | 87.2% | 100.0% of 150 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 150 / 172 | 87.2% | 100.0% of 150 | ≥80% support |
| GO | GO:0030433 Biological Process | obsolete ubiquitin-dependent ERAD pathway | 150 / 172 | 87.2% | 100.0% of 150 | ≥80% support |
| Pfam | PF13639 | zf-RING_2 — Ring finger domain | 92 / 172 | 53.5% | 62.6% of 147 | ≥50% support |
| KEGG | K15695 | RNF103, KF1 — Ubiquitin system | 131 / 172 | 76.2% | 99.2% of 132 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0006.g12.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Aurelia aurita | scaffold265.g30.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold1635.g1.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000033607.1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9R1W3 E3 ubiquitin-protein ligase RNF103 OS=Mus musculus OX=10090 | JBrowse |
| Acropora awi | aawi_s0059.g27.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora cervicornis | KAK2572438.1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Aurelia coerulea | evm.model.ptg000002l.274 | XP_002160354.3 | E3 ubiquitin-protein ligase RNF103 [Hydra vulgaris] | Q9R1W3 E3 ubiquitin-protein ligase RNF103 OS=Mus musculus OX=10090 | JBrowse |
| Acropora cytherea | acyt_s0209.g23.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora digitifera | chr3Alt.g5501.t1 | none | – | JBrowse | |
| Acropora digitifera | chr3Alt.g5501.t2 | none | – | JBrowse | |
| Acropora echinata | aech_s0009.g87.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Actinia equina | EGACTEQ4350054159-PA | XP_031573405.1 | E3 ubiquitin-protein ligase RNF103-like [Actinia tenebrosa] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora florida | aflo_s0284.g18.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora gemmifera | agem_s0011.g149.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora hemprichii | Ahemp_001061-T1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9R1W3 E3 ubiquitin-protein ligase RNF103 OS=Mus musculus OX=10090 | JBrowse |
| Acropora hyacinthus | ahya_s0012.g247.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g26254 | XP_020898222.1 | E3 ubiquitin-protein ligase RNF103 [Exaiptasia diaphana] | Q9R1W3 E3 ubiquitin-protein ligase RNF103 OS=Mus musculus OX=10090 | JBrowse |
| Acropora intermedia | aint_s0033.g84.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Actinoscyphia liui | gene19218.t1 | XP_020898222.1 | E3 ubiquitin-protein ligase RNF103 [Exaiptasia diaphana] | Q9EPZ8 E3 ubiquitin-protein ligase RNF103 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora loripes | alor_g21276.t1 | XP_015753316.1 | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF103-like [Acropora digitifera] | Q9R1W3 E3 ubiquitin-protein ligase RNF103 OS=Mus musculus OX=10090 | JBrowse |
