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This orthogroup contains 158 genes from 125 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 158 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11239 | DNA-DIRECTED RNA POLYMERASE | 131 / 158 | 82.9% | 99.2% of 132 | ≥80% support |
| Pfam | PF01096 | TFIIS_C — Transcription factor S-II (TFIIS) | 132 / 158 | 83.5% | 95.0% of 139 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 139 / 158 | 88.0% | 100.0% of 139 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 132 / 158 | 83.5% | 95.0% of 139 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 132 / 158 | 83.5% | 95.0% of 139 | ≥80% support |
| GO | GO:0001056 Molecular Function | RNA polymerase III activity | 131 / 158 | 82.9% | 94.2% of 139 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 131 / 158 | 82.9% | 94.2% of 139 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 131 / 158 | 82.9% | 94.2% of 139 | ≥80% support |
| GO | GO:0006386 Biological Process | termination of RNA polymerase III transcription | 131 / 158 | 82.9% | 94.2% of 139 | ≥80% support |
| Pfam | PF02150 | RNA_POL_M_15KD — RNA polymerases M/15 Kd subunit | 118 / 158 | 74.7% | 84.9% of 139 | ≥50% support |
| KEGG | K03019 | RPC11, POLR3K — Transcription machinery | 117 / 158 | 74.1% | 100.0% of 117 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0055.g71.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Aurelia aurita | scaffold90.g57.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000039855.1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora awi | aawi_s0058.g66.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Aurelia coerulea | evm.model.ptg000024l.255 | XP_047138405.1 | DNA-directed RNA polymerase III subunit RPC10-like [Hydra vulgaris] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora cytherea | acyt_s0097.g61.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora digitifera | chr10Alt.g20973.t1 | none | – | JBrowse | |
| Actinia equina | EGACTEQ4350017910-PA | XP_031558738.1 | DNA-directed RNA polymerase III subunit RPC10-like [Actinia tenebrosa] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Actinia equina | EGACTEQ4350029764-PA | XP_031558738.1 | DNA-directed RNA polymerase III subunit RPC10-like [Actinia tenebrosa] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora florida | aflo_s0066.g57.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora gemmifera | agem_s0024.g149.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora hemprichii | Ahemp_009024-T1 | XP_029195718.2 | DNA-directed RNA polymerase III subunit RPC10-like [Acropora millepora] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora hyacinthus | ahya_s0029.g64.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora intermedia | aint_s0083.g45.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Actinoscyphia liui | gene24423.t2 | XP_031558738.1 | DNA-directed RNA polymerase III subunit RPC10-like [Actinia tenebrosa] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora loripes | alor_g6856.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Actinia mediterranea | ENSQPTP00000038320.1 | XP_031558738.1 | DNA-directed RNA polymerase III subunit RPC10-like [Actinia tenebrosa] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Actinia mediterranea | ENSQPTP00000077949.1 | XP_031558738.1 | DNA-directed RNA polymerase III subunit RPC10-like [Actinia tenebrosa] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora microphthalma | amic_s0092.g48.t1 | XP_015757358.1 | PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like [Acropora digitifera] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
| Acropora millepora | XP_029195718.2 | XP_029195718.2 | DNA-directed RNA polymerase III subunit RPC10-like [Acropora millepora] | Q9Y2Y1 DNA-directed RNA polymerase III subunit RPC10 OS=Homo sapien | JBrowse |
