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This orthogroup contains 154 genes from 125 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 154 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12882 | SUPPRESSOR OF TY 4 | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| Pfam | PF06093 | Spt4 | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0000993 Molecular Function | RNA polymerase II complex binding | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0006325 Biological Process | chromatin organization | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0032044 Cellular Component | DSIF complex | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0034243 Biological Process | regulation of transcription elongation by RNA polymerase II | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| GO | GO:0140673 Biological Process | transcription elongation-coupled chromatin remodeling | 141 / 154 | 91.6% | 100.0% of 141 | ≥80% support |
| KEGG | K15171 | SUPT4H1, SPT4 — Messenger RNA biogenesis | 135 / 154 | 87.7% | 100.0% of 135 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0130.g39.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Aurelia aurita | scaffold81.g62.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000050154.1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | P63271 Transcription elongation factor SPT4-A OS=Mus musculus OX=10 | JBrowse |
| Acropora awi | aawi_s0142.g6.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Acropora cervicornis | KAK2556128.1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | P63271 Transcription elongation factor SPT4-A OS=Mus musculus OX=10 | JBrowse |
| Acropora cytherea | acyt_s0174.g39.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Acropora digitifera | chr9Alt.g20283.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0010.g225.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Actinia equina | EGACTEQ4350017348-PA | XP_031558267.1 | transcription elongation factor SPT4-A-like [Actinia tenebrosa] | P63271 Transcription elongation factor SPT4-A OS=Mus musculus OX=10 | JBrowse |
| Acropora florida | aflo_s0651.g2.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Acropora gemmifera | agem_s0060.g2.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Acropora hemprichii | Ahemp_015575-T1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | P63271 Transcription elongation factor SPT4-A OS=Mus musculus OX=10 | JBrowse |
| Acropora hyacinthus | ahya_s0074.g92.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g6892 | XP_020916690.1 | transcription elongation factor SPT4 [Exaiptasia diaphana] | P63271 Transcription elongation factor SPT4-A OS=Mus musculus OX=10 | JBrowse |
| Acropora intermedia | aint_s0382.g33.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Acropora loripes | alor_g15050.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q6DGQ0 Transcription elongation factor SPT4 OS=Danio rerio OX=7955 | JBrowse |
| Acropora microphthalma | amic_s0327.g5.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Acropora millepora | XP_029207475.2 | XP_029207475.2 | LOW QUALITY PROTEIN: transcription elongation factor SPT4-like [Acropora millepora] | Q6DGQ0 Transcription elongation factor SPT4 OS=Danio rerio OX=7955 | JBrowse |
| Acropora muricata | amur_s0127.g4.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
| Acropora nasuta | anas_s0332.g3.t1 | XP_015773051.1 | PREDICTED: transcription elongation factor SPT4-A-like [Acropora digitifera] | Q9TVQ5 Transcription elongation factor SPT4 OS=Drosophila melanogas | JBrowse |
