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Support counts the member genes carrying the term. % of genes is that count over all 39 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12097 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED | 31 / 39 | 79.5% | 100.0% of 31 | ≥50% support |
| GO | GO:0000245 Biological Process | spliceosomal complex assembly | 31 / 39 | 79.5% | 100.0% of 31 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 31 / 39 | 79.5% | 100.0% of 31 | ≥50% support |
| GO | GO:0005686 Cellular Component | U2 snRNP | 31 / 39 | 79.5% | 100.0% of 31 | ≥50% support |
| GO | GO:0071004 Cellular Component | U2-type prespliceosome | 31 / 39 | 79.5% | 100.0% of 31 | ≥50% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 31 / 39 | 79.5% | 100.0% of 31 | ≥50% support |
| GO | GO:0005689 Cellular Component | U12-type spliceosomal complex | 30 / 39 | 76.9% | 96.8% of 31 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita complex sp. Pacific | scaffold223.g33.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000046436.1 | XP_044179779.1 | splicing factor 3B subunit 1-like isoform X1 [Acropora millepora] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Acropora awi | aawi_s1509.g2.t1 | XP_044179779.1 | splicing factor 3B subunit 1-like isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora hyacinthus | ahya_s0939.g1.t1 | XP_044179779.1 | splicing factor 3B subunit 1-like isoform X1 [Acropora millepora] | – | JBrowse |
| Actinia mediterranea | ENSQPTP00000001129.1 | XP_031556479.1 | splicing factor 3B subunit 1-like isoform X1 [Actinia tenebrosa] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Actinia mediterranea | ENSQPTP00000045361.1 | XP_031556479.1 | splicing factor 3B subunit 1-like isoform X1 [Actinia tenebrosa] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Aurelia sp. 4 Dawson et al 2005 | ENSDKXP00000026074.1 | none | – | JBrowse | |
| Aurelia sp. 4 Dawson et al 2005 | ENSDKXP00000026078.1 | none | – | JBrowse | |
| Acropora spathulata | ENSEWQP00005043626.1 | XP_044179779.1 | splicing factor 3B subunit 1-like isoform X1 [Acropora millepora] | – | JBrowse |
| Anthopleura xanthogrammica | ENSOJPP00000033878.1 | XP_031556479.1 | splicing factor 3B subunit 1-like isoform X1 [Actinia tenebrosa] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Candelabrum cocksii | ENSQNNP00000026534.1 | XP_047135871.1 | splicing factor 3B subunit 1 isoform X2 [Hydra vulgaris] | O57683 Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf | JBrowse |
| Catostylus mosaicus | ENSSJYP00000002471.1 | XP_047135871.1 | splicing factor 3B subunit 1 isoform X2 [Hydra vulgaris] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Cyphastrea salae | ENSOFVP00000022508.1 | XP_022785873.1 | splicing factor 3B subunit 1-like isoform X1 [Stylophora pistillata] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Chrysogorgia sp. JL179-B06 | Csp0G329360 | none | – | JBrowse | |
| Cassiopea sp. PORT0000214 | ENSNWCP00000014809.1 | none | – | JBrowse | |
| Cassiopea xamachana | Cxam_g29874.t1 | XP_044179779.1 | splicing factor 3B subunit 1-like isoform X1 [Acropora millepora] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Duncanopsammia axifuga | ENSXFYP00000035790.1 | CAH3177557.1 | unnamed protein product [Porites lobata] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Eunicella cavolini | ENSLDHP00000031049.1 | XP_046846232.1 | splicing factor 3B subunit 1-like [Xenia sp. Carnegie-2017] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Eunicella verrucosa | ENSNOVP00005019806.1 | XP_046846232.1 | splicing factor 3B subunit 1-like [Xenia sp. Carnegie-2017] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Hemicorallium imperiale | evm.model.Chr01.1419 | XP_028403316.1 | splicing factor 3B subunit 1-like isoform X1 [Dendronephthya gigantea] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
