Species Overview — Diadumene cincta

CnidoSite currently holds 2 of the 15 data types it covers for Diadumene cincta. Each entry below links straight into the corresponding module already filtered to this species; the greyed-out entries have no data for it in the current release. Use the box underneath to open the same overview for any other species.

Data available for this species

Genome assembly

✓ available

Assembled genome (size, level, N50, BUSCO)

Open Genome →
Full assembly record · BUSCO · TFs / Ubs · Pan-geneset

Gene annotation

— not available

Predicted gene models with CDS / transcript / protein sequences

Open Gene models anyway →

Functional annotation

— not available

InterPro, Pfam, PANTHER, GO and KEGG assignments

Open Function anyway →

Gene family (orthogroup)

— not available

OrthoFinder orthogroups and TF / ubiquitin families

Open Gene family anyway →

Bulk transcriptome

— not available

RNA-seq samples with expression values (TPM)

Open Transcriptome anyway →

Co-expression network

— not available

Positive / negative co-expression edges

Open Co-expression anyway →

Single-cell

— not available

scRNA-seq datasets, cell atlas and marker genes

Open Single-cell anyway →

Proteome

— not available

Mass-spectrometry proteomics samples

Open Proteome anyway →

Epigenome

— not available

DNA methylation, miRNA-seq, ATAC-seq, ChIP-seq

Open Epigenome anyway →

Metagenome

— not available

Host-associated metagenomic samples

Open Metagenome anyway →

Phenotype

— not available

Trait measurements with geo-referencing

Open Phenotype anyway →

Paleobiology

— not available

Fossil occurrences and stratigraphic records

Open Paleobiology anyway →

Mitogenome

✓ 25 records

Mitochondrial genome record and gene annotations

Open Mitogenome →

Transposable elements

— not available

Repeat annotation of assembled genomes

Open TE anyway →

Genome browser

— not available

Interactive JBrowse track for the assembly

Open JBrowse anyway →

Assembly record

Assembly

Assembly name
ASM4447314v1
Assembly level
Scaffold
Assembly accession
GCA_044473145.1
Assembled by
Iridian Genomes
Year
2024

Genome statistics

Genome size
349.51 Mb
GC content
35.5%
Scaffolds
425,998
Scaffold N50
1.9 kb
Contigs
431,230
Contig N50
1.8 kb

Annotation

BUSCO
Complete, single-copy 30.7%Complete, duplicated 0.4%Fragmented 34.6%Missing 34.3%

Identifiers

WGS accession
JBIDEP01
BioProject
PRJNA1138232

Other Hexacorallia species

Actinernus sp. WN-2022Actinia equinaActinia mediterraneaActinia tenebrosaAnthopleura xanthogrammicaCondylactis giganteaParacondylactis sinensisActinoscyphia liuiAlvinactis idsseensis sp. Nov.Actinostola sp. cb2023Exaiptasia diaphanaDiadumene lineataEdwardsia elegansNematostella vectensisScolanthus callimorphusParaphelliactis xishaensis sp. nov.Telmatactis stephensoniMetridium senilePlumapathes pennaceaRhodactis osculiferaRicordea floridaAcropora acuminataAcropora austeraAcropora awiAcropora cervicornisAcropora cythereaAcropora digitiferaAcropora echinataAcropora floridaAcropora gemmiferaAcropora hemprichiiAcropora hyacinthusAcropora intermediaAcropora loripesAcropora microphthalmaAcropora milleporaAcropora muricataAcropora nasutaAcropora palmataAcropora pulchraAcropora selagoAcropora spathulataAcropora tenuisAcropora yongeiAstreopora myriophthalmaMontipora cactusMontipora capitataMontipora capricornisMontipora efflorescensMontipora foliosaMontipora griseaLeptoseris scabraPachyseris speciosaStephanocoenia interseptaCatalaphyllia jardineiDesmophyllum pertusumFimbriaphyllia ancoraLophelia pertusaCladopsammia gracilisDendrophyllia cribrosaDuncanopsammia axifugaTubastraea coccineaTurbinaria reniformisGalaxea fascicularisPodabacia crustaceaMicromussa lordhowensisDendrogyra cylindrusMeandrina meandritesCyphastrea salaeEchinopora horridaOrbicella faveolataOrbicella franksiPlatygyra sinensisColpophyllia natansOculina arbusculaOculina patagonicaMadracis auretenraMadracis senariaPocillopora acutaPocillopora damicornis
See all Hexacorallia species in the coverage matrix →

Availability shown here is recomputed from the live database every hour (last built 2026-09-22 17:41). If a data type is listed as unavailable for Diadumene cincta, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.

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