← Back to the gene family browser
This orthogroup contains 197 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 197 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11489 | 40S RIBOSOMAL PROTEIN SA | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| Pfam | PF00318 | Ribosomal_S2 — Ribosomal protein S2 | 173 / 197 | 87.8% | 98.3% of 176 | ≥80% support |
| GO | GO:0000028 Biological Process | ribosomal small subunit assembly | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| GO | GO:0002181 Biological Process | cytoplasmic translation | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| GO | GO:0015935 Cellular Component | small ribosomal subunit | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| GO | GO:0022627 Cellular Component | cytosolic small ribosomal subunit | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| GO | GO:0030686 Cellular Component | 90S preribosome | 178 / 197 | 90.4% | 100.0% of 178 | ≥80% support |
| GO | GO:0005840 Cellular Component | ribosome | 173 / 197 | 87.8% | 97.2% of 178 | ≥80% support |
| KEGG | K02998 | RP-SAe, RPSA — Ribosome | 171 / 197 | 86.8% | 100.0% of 171 | ≥80% support |
| Pfam | PF16122 | 40S_SA_C — 40S ribosomal protein SA C-terminus | 128 / 197 | 65.0% | 72.7% of 176 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0061.g70.t1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Alatina alata | Aala_g2019.t1 | XP_039255206.1 | SCAN domain-containing protein 3-like [Styela clava] | Q6R2W3 SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Aurelia aurita | scaffold210.g3.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold210.g3.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold384.g8.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold384.g8.t2 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000021278.1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora awi | aawi_s0158.g58.t1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora cervicornis | KAK2557096.1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora cytherea | acyt_s0151.g89.t1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora cytherea | acyt_s2235.g1.t1 | XP_015778504.1 | PREDICTED: 40S ribosomal protein SA-like [Acropora digitifera] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora digitifera | chr13Alt.g27069.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0052.g83.t1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Actinia equina | EGACTEQ4350002706-PA | XP_031557709.1 | 40S ribosomal protein SA-like [Actinia tenebrosa] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Actinia equina | EGACTEQ4350003345-PA | XP_031557709.1 | 40S ribosomal protein SA-like [Actinia tenebrosa] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora florida | aflo_s0057.g57.t1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora gemmifera | agem_s0070.g77.t1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora hemprichii | Ahemp_015789-T1 | XP_015778504.1 | PREDICTED: 40S ribosomal protein SA-like [Acropora digitifera] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Acropora hyacinthus | ahya_s0169.g56.t1 | XP_029193153.1 | 40S ribosomal protein SA-like [Acropora millepora] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g9622 | XP_031557709.1 | 40S ribosomal protein SA-like [Actinia tenebrosa] | A7RKS5 Small ribosomal subunit protein uS2 OS=Nematostella vectensi | JBrowse |
