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This orthogroup contains 191 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 191 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46173 | CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL | 171 / 191 | 89.5% | 100.0% of 171 | ≥80% support |
| Pfam | PF12627 | PolyA_pol_RNAbd — Probable RNA and SrmB- binding site of polymerase A | 161 / 191 | 84.3% | 98.2% of 164 | ≥80% support |
| Pfam | PF01743 | PolyA_pol — Poly A polymerase head domain | 160 / 191 | 83.8% | 97.6% of 164 | ≥80% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 171 / 191 | 89.5% | 100.0% of 171 | ≥80% support |
| GO | GO:0008033 Biological Process | tRNA processing | 171 / 191 | 89.5% | 100.0% of 171 | ≥80% support |
| GO | GO:0005739 Cellular Component | mitochondrion | 165 / 191 | 86.4% | 96.5% of 171 | ≥80% support |
| GO | GO:0001680 Biological Process | tRNA 3'-terminal CCA addition | 164 / 191 | 85.9% | 95.9% of 171 | ≥80% support |
| GO | GO:1990180 Biological Process | mitochondrial tRNA 3'-end processing | 164 / 191 | 85.9% | 95.9% of 171 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 160 / 191 | 83.8% | 93.6% of 171 | ≥80% support |
| GO | GO:0006396 Biological Process | RNA processing | 160 / 191 | 83.8% | 93.6% of 171 | ≥80% support |
| GO | GO:0016779 Molecular Function | nucleotidyltransferase activity | 160 / 191 | 83.8% | 93.6% of 171 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0109.g35.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Alatina alata | Aala_g1336.t1 | XP_041460826.1 | uncharacterized protein K02A2.6-like [Lytechinus variegatus] | Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus OS=D | JBrowse |
| Alatina alata | Aala_g670.t1 | XP_044175563.1 | uncharacterized protein LOC122958683 [Acropora millepora] | Q8BJT9 ER degradation-enhancing alpha-mannosidase-like protein 2 OS | JBrowse |
| Aurelia aurita | scaffold202.g13.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000041370.1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora awi | aawi_s0150.g41.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora cervicornis | KAK2562219.1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora cytherea | acyt_s0070.g70.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora digitifera | chr8Alt.g16726.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0019.g39.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Actinia equina | EGACTEQ4350010201-PA | XP_031572686.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Actinia tenebrosa] | Q96Q11 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Homo sap | JBrowse |
| Actinia equina | EGACTEQ4350042400-PA | XP_031572686.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Actinia tenebrosa] | Q96Q11 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Homo sap | JBrowse |
| Acropora florida | aflo_s0243.g39.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora gemmifera | agem_s0106.g80.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora hemprichii | Ahemp_012057-T1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora hyacinthus | ahya_s0243.g37.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g1026 | XP_020917468.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial [Exaiptasia diaphana] | Q8K1J6 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Mus musc | JBrowse |
| Acropora intermedia | aint_s0039.g56.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Actinoscyphia liui | gene11704.t1 | XP_020917468.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial [Exaiptasia diaphana] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
| Acropora loripes | alor_g20934.t1 | XP_029196064.1 | CCA tRNA nucleotidyltransferase 1, mitochondrial-like [Acropora millepora] | F6NXI9 CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Danio re | JBrowse |
