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Support counts the member genes carrying the term. % of genes is that count over all 178 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD | 150 / 178 | 84.3% | 97.4% of 154 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 143 / 178 | 80.3% | 92.9% of 154 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 150 / 178 | 84.3% | 99.3% of 151 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 150 / 178 | 84.3% | 99.3% of 151 | ≥80% support |
| PANTHER | PTHR47959 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 93 / 178 | 52.3% | 60.4% of 154 | ≥50% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 126 / 178 | 70.8% | 83.4% of 151 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0009.g81.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q9C718 DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thalia | JBrowse |
| Alatina alata | Aala_g1767.t1 | CAH3032310.1 | unnamed protein product [Porites lobata] | Q6H874 DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subs | JBrowse |
| Aurelia aurita | scaffold1750.g1.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold1750.g1.t2 | none | – | JBrowse | |
| Aurelia aurita | scaffold20.g61.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold20.g61.t2 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold176.g11.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000005893.1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q2FY15 DEAD-box ATP-dependent RNA helicase CshB OS=Staphylococcus a | JBrowse |
| Acropora awi | aawi_s0141.g20.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q2FY15 DEAD-box ATP-dependent RNA helicase CshB OS=Staphylococcus a | JBrowse |
| Acropora cervicornis | KAK2570818.1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q86TM3 Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX | JBrowse |
| Acropora cytherea | acyt_s0005.g202.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q9C718 DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thalia | JBrowse |
| Acropora digitifera | chr12Alt.g25443.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0003.g317.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q9C718 DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thalia | JBrowse |
| Actinia equina | EGACTEQ4350051463-PA | XP_031549403.1 | probable ATP-dependent RNA helicase YfmL isoform X1 [Actinia tenebrosa] | Q81E85 DEAD-box ATP-dependent RNA helicase CshC OS=Bacillus cereus | JBrowse |
| Acropora florida | aflo_s0013.g46.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q2FY15 DEAD-box ATP-dependent RNA helicase CshB OS=Staphylococcus a | JBrowse |
| Acropora gemmifera | agem_s0135.g21.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | P54475 DEAD-box ATP-dependent RNA helicase CshB OS=Bacillus subtili | JBrowse |
| Acropora hemprichii | Ahemp_001637-T1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q86TM3 Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX | JBrowse |
| Acropora hyacinthus | ahya_s0020.g259.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q9C718 DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thalia | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g5044 | XP_031549403.1 | probable ATP-dependent RNA helicase YfmL isoform X1 [Actinia tenebrosa] | Q81E85 DEAD-box ATP-dependent RNA helicase CshC OS=Bacillus cereus | JBrowse |
| Acropora intermedia | aint_s0019.g54.t1 | XP_029189872.2 | probable ATP-dependent RNA helicase YfmL [Acropora millepora] | Q2FY15 DEAD-box ATP-dependent RNA helicase CshB OS=Staphylococcus a | JBrowse |
