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This orthogroup contains 165 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 165 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | 154 / 165 | 93.3% | 100.0% of 154 | ≥80% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 154 / 165 | 93.3% | 100.0% of 154 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 144 / 165 | 87.3% | 100.0% of 144 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 144 / 165 | 87.3% | 100.0% of 144 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 144 / 165 | 87.3% | 100.0% of 144 | ≥80% support |
| GO | GO:0009653 Biological Process | anatomical structure morphogenesis | 144 / 165 | 87.3% | 100.0% of 144 | ≥80% support |
| GO | GO:0030154 Biological Process | cell differentiation | 144 / 165 | 87.3% | 100.0% of 144 | ≥80% support |
| KEGG | K09270 | SOX7S — Transcription factors | 127 / 165 | 77.0% | 98.5% of 129 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0001.g24.t1 | XP_015756769.1 | PREDICTED: protein capicua homolog [Acropora digitifera] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Alatina alata | Aala_g1511.t1 | XP_047122905.1 | SCAN domain-containing protein 3-like [Hydra vulgaris] | A4Z943 Zinc finger BED domain-containing protein 5 OS=Bos taurus OX | JBrowse |
| Aurelia aurita | scaffold343.g20.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold12.g8.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000034685.1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Acropora awi | aawi_s0003.g89.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Acropora cervicornis | KAK2565109.1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Aurelia coerulea | evm.model.ptg000006l.407 | APW77286.1 | SoxF2 [Hydractinia echinata] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Acropora cytherea | acyt_s0039.g3.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Acropora digitifera | chr3Alt.g7434.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0084.g55.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Actinia equina | EGACTEQ4350034804-PA | XP_031565860.1 | transcription factor SOX-21-like [Actinia tenebrosa] | Q20201 Transcription factor sox-3 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Acropora florida | aflo_s0129.g84.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Acropora gemmifera | agem_s0058.g70.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Acropora hemprichii | Ahemp_000215-T1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Acropora hyacinthus | ahya_s0044.g82.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g29557 | XP_020907804.1 | transcription factor sox-2 [Exaiptasia diaphana] | Q3KQ35 Transcription factor Sox-17-alpha-A OS=Xenopus laevis OX=835 | JBrowse |
| Acropora intermedia | aint_s0110.g32.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
| Actinoscyphia liui | gene27718.t1 | XP_020907804.1 | transcription factor sox-2 [Exaiptasia diaphana] | P40646 Transcription factor SOX-7 OS=Mus musculus OX=10090 GN=Sox7 | JBrowse |
| Acropora loripes | alor_g11679.t1 | XP_029200764.2 | protein capicua homolog [Acropora millepora] | P35713 Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 | JBrowse |
