← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 155 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 128 / 155 | 82.6% | 100.0% of 128 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 128 / 155 | 82.6% | 100.0% of 128 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 128 / 155 | 82.6% | 100.0% of 128 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 126 / 155 | 81.3% | 98.4% of 128 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 118 / 155 | 76.1% | 92.2% of 128 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 99 / 155 | 63.9% | 77.3% of 128 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 91 / 155 | 58.7% | 71.1% of 128 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0013.g17.t1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | Q06453 Homeobox protein aristaless OS=Drosophila melanogaster OX=72 | JBrowse |
| Alatina alata | Aala_g2187.t1 | XP_053405128.1 | uncharacterized protein LOC128558887 [Mercenaria mercenaria] | O35750 Short stature homeobox protein 2 (Fragment) OS=Rattus norveg | JBrowse |
| Aurelia aurita | scaffold12.g205.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold12.g205.t2 | none | – | JBrowse | |
| Aurelia aurita | scaffold134.g73.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000001600.1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | Q06453 Homeobox protein aristaless OS=Drosophila melanogaster OX=72 | JBrowse |
| Acropora awi | aawi_s0022.g214.t1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | – | JBrowse |
| Acropora cervicornis | KAK2566905.1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | Q9Y2V3 Retinal homeobox protein Rx OS=Homo sapiens OX=9606 GN=RAX P | JBrowse |
| Acropora cytherea | acyt_s0239.g9.t1 | XP_029200096.2 | uncharacterized protein LOC114964826 [Acropora millepora] | Q9Y2V3 Retinal homeobox protein Rx OS=Homo sapiens OX=9606 GN=RAX P | JBrowse |
| Acropora digitifera | chr2Alt.g3259.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0056.g128.t1 | XP_029200096.2 | uncharacterized protein LOC114964826 [Acropora millepora] | – | JBrowse |
| Acropora echinata | aech_s0787.g1.t1 | XP_029200096.2 | uncharacterized protein LOC114964826 [Acropora millepora] | – | JBrowse |
| Actinia equina | EGACTEQ4350018646-PA | XP_031550613.1 | homeobox protein ceh-37-like [Actinia tenebrosa] | Q06453 Homeobox protein aristaless OS=Drosophila melanogaster OX=72 | JBrowse |
| Acropora florida | aflo_s0358.g19.t1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | – | JBrowse |
| Acropora gemmifera | agem_s0007.g31.t1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | Q06453 Homeobox protein aristaless OS=Drosophila melanogaster OX=72 | JBrowse |
| Acropora hemprichii | Ahemp_011180-T1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | Q9Y2V3 Retinal homeobox protein Rx OS=Homo sapiens OX=9606 GN=RAX P | JBrowse |
| Acropora hyacinthus | ahya_s0086.g112.t1 | XP_029200096.2 | uncharacterized protein LOC114964826 [Acropora millepora] | Q9Y2V3 Retinal homeobox protein Rx OS=Homo sapiens OX=9606 GN=RAX P | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g3293 | KXJ26003.1 | Retinal homeobox protein Rx1 [Exaiptasia diaphana] | A6NNA5 Dorsal root ganglia homeobox protein OS=Homo sapiens OX=9606 | JBrowse |
| Acropora intermedia | aint_s0112.g42.t1 | XP_015754964.1 | PREDICTED: uncharacterized protein LOC107334535 [Acropora digitifera] | Q06453 Homeobox protein aristaless OS=Drosophila melanogaster OX=72 | JBrowse |
| Actinoscyphia liui | gene03306.t1 | KXJ26003.1 | Retinal homeobox protein Rx1 [Exaiptasia diaphana] | Q9IAL2 Visual system homeobox 1 OS=Gallus gallus OX=9031 GN=VSX1 PE | JBrowse |
