Benchmarking Universal Single-Copy Ortholog (BUSCO) genes were identified for all cnidaria species. You can select different class or species to see details such as the busco id, gene id, status and length. Detailed gene structure and sequences are shown in JBrowse.
BUSCO completeness was re-tabulated for every species from the raw hit table, counting each BUSCO once per species rather than counting hit rows, and scored against the cnidaria_odb12 lineage (3,203 BUSCOs). 13 of 136 species meet the high-quality threshold (C ≥ 90 %, D ≤ 10 %, F ≤ 5 %). This set is the basis for the core ortholog resource.
| Species | Class | Lineage | C (%) | S (%) | D (%) | F (%) | M (%) | Quality | BUSCO details |
|---|---|---|---|---|---|---|---|---|---|
| Pocillopora acuta | Hexacorallia | cnidaria_odb12 | 97.8 | 96.2 | 1.5 | 1.7 | 0.5 | ✓ | view |
| Pocillopora meandrina | Hexacorallia | cnidaria_odb12 | 96.2 | 94.3 | 1.9 | 1.9 | 1.9 | ✓ | view |
| Colpophyllia natans | Hexacorallia | cnidaria_odb12 | 95.8 | 89.8 | 6.0 | 2.7 | 1.5 | ✓ | view |
| Actinia mediterranea BUSCO re-run | Hexacorallia | cnidaria_odb12 | 95.6 | 94.8 | 0.8 | 1.7 | 2.7 | ✓ | view |
| Porites compressa | Hexacorallia | cnidaria_odb12 | 95.2 | 94.0 | 1.2 | 3.7 | 1.2 | ✓ | view |
| Porites evermanni | Hexacorallia | cnidaria_odb12 | 95.1 | 89.1 | 6.0 | 3.7 | 1.3 | ✓ | view |
| Dendrogyra cylindrus | Hexacorallia | cnidaria_odb12 | 95.1 | 87.1 | 7.9 | 3.0 | 2.0 | ✓ | view |
| Fimbriaphyllia ancora | Hexacorallia | cnidaria_odb12 | 94.2 | 93.6 | 0.6 | 1.9 | 3.9 | ✓ | view |
| Paragorgia papillata | Octocorallia | cnidaria_odb12 | 93.9 | 91.5 | 2.3 | 4.1 | 2.0 | ✓ | view |
| Acropora digitifera | Hexacorallia | cnidaria_odb12 | 92.9 | 84.8 | 8.1 | 4.2 | 3.0 | ✓ | view |
| Hydractinia symbiolongicarpus | Hydrozoa | cnidaria_odb12 | 92.7 | 88.3 | 4.4 | 2.8 | 4.6 | ✓ | view |
| Astrangia poculata | Hexacorallia | cnidaria_odb12 | 91.4 | 86.6 | 4.8 | 4.7 | 3.9 | ✓ | view |
| Actinoscyphia liui | Hexacorallia | cnidaria_odb12 | 91.3 | 81.7 | 9.5 | 4.3 | 4.5 | ✓ | view |
| Acropora palmata | Hexacorallia | cnidaria_odb12 | 99.7 | 71.5 | 28.2 | 0.1 | 0.2 | · | view |
| Orbicella franksi | Hexacorallia | cnidaria_odb12 | 99.4 | 75.7 | 23.8 | 0.3 | 0.3 | · | view |
| Nematostella vectensis | Hexacorallia | cnidaria_odb12 | 99.3 | 71.7 | 27.7 | 0.2 | 0.5 | · | view |
| CGRAC (Callogorgia gracilis + Cladopsammia gracilis) merged code | — | cnidaria_odb12 | 99.0 | 12.1 | 86.9 | 0.9 | 0.1 | · | view |
| Porites lutea | Hexacorallia | cnidaria_odb12 | 98.9 | 78.3 | 20.6 | 0.4 | 0.7 | · | view |
| PSINE (Paracondylactis sinensis + Platygyra sinensis) merged code | — | cnidaria_odb12 | 98.8 | 34.1 | 64.7 | 0.8 | 0.4 | · | view |
| Actinia tenebrosa | Hexacorallia | cnidaria_odb12 | 98.7 | 80.8 | 17.9 | 1.0 | 0.3 | · | view |
| Montipora foliosa | Hexacorallia | cnidaria_odb12 | 98.6 | 70.4 | 28.2 | 0.4 | 1.0 | · | view |
| Pocillopora verrucosa | Hexacorallia | cnidaria_odb12 | 98.6 | 77.4 | 21.2 | 0.5 | 0.9 | · | view |
| Dendronephthya gigantea | Octocorallia | cnidaria_odb12 | 98.0 | 76.2 | 21.8 | 0.8 | 1.2 | · | view |
| Acropora millepora | Hexacorallia | cnidaria_odb12 | 97.9 | 70.7 | 27.3 | 0.4 | 1.6 | · | view |
| Anthopleura xanthogrammica | Hexacorallia | cnidaria_odb12 | 97.9 | 54.8 | 43.1 | 1.3 | 0.8 | · | view |
| Montipora capricornis | Hexacorallia | cnidaria_odb12 | 97.9 | 69.3 | 28.7 | 0.6 | 1.5 | · | view |
| ASP (Actinernus sp. WN-2022 + Actinostola sp. cb2023 + Aurelia sp. 4 Dawson et al 2005) merged code | — | cnidaria_odb12 | 97.6 | 14.4 | 83.2 | 1.9 | 0.5 | · | view |
| Porites lobata | Hexacorallia | cnidaria_odb12 | 97.6 | 51.1 | 46.5 | 1.3 | 1.2 | · | view |
| Plumapathes pennacea | Hexacorallia | cnidaria_odb12 | 97.5 | 57.1 | 40.4 | 1.5 | 1.0 | · | view |
| Meandrina meandrites | Hexacorallia | cnidaria_odb12 | 97.4 | 71.4 | 26.0 | 1.5 | 1.1 | · | view |
| Metridium senile | Hexacorallia | cnidaria_odb12 | 97.4 | 68.3 | 29.0 | 1.4 | 1.2 | · | view |
| Oculina arbuscula | Hexacorallia | cnidaria_odb12 | 97.4 | 67.9 | 29.5 | 1.3 | 1.3 | · | view |
| Duncanopsammia axifuga | Hexacorallia | cnidaria_odb12 | 97.0 | 56.8 | 40.2 | 1.8 | 1.1 | · | view |
| CSP (Chrysogorgia sp. JL179-B06 + Cassiopea sp. PORT0000214) merged code | — | cnidaria_odb12 | 97.0 | 17.7 | 79.3 | 1.8 | 1.2 | · | view |
| Porites rus | Hexacorallia | cnidaria_odb12 | 97.0 | 65.1 | 31.9 | 1.7 | 1.3 | · | view |
| Acropora spathulata | Hexacorallia | cnidaria_odb12 | 96.9 | 46.6 | 50.4 | 1.7 | 1.3 | · | view |
| Madracis senaria | Hexacorallia | cnidaria_odb12 | 96.9 | 69.1 | 27.8 | 1.8 | 1.3 | · | view |
| Condylactis gigantea | Hexacorallia | cnidaria_odb12 | 96.6 | 58.9 | 37.7 | 1.6 | 1.8 | · | view |
| Leptogorgia sarmentosa | Octocorallia | cnidaria_odb12 | 96.6 | 45.9 | 50.7 | 2.2 | 1.3 | · | view |
| Acropora austera | Hexacorallia | cnidaria_odb12 | 96.4 | 50.6 | 45.8 | 2.1 | 1.5 | · | view |
| Siderastrea radians | Hexacorallia | cnidaria_odb12 | 96.2 | 45.9 | 50.3 | 2.2 | 1.6 | · | view |
| Micromussa lordhowensis | Hexacorallia | cnidaria_odb12 | 96.1 | 66.9 | 29.2 | 2.4 | 1.5 | · | view |
| Rhodactis osculifera | Hexacorallia | cnidaria_odb12 | 95.9 | 63.7 | 32.2 | 2.5 | 1.7 | · | view |
| Porites cylindrica | Hexacorallia | cnidaria_odb12 | 95.3 | 70.8 | 24.5 | 2.5 | 2.2 | · | view |
| Cyphastrea salae | Hexacorallia | cnidaria_odb12 | 95.3 | 69.6 | 25.7 | 3.0 | 1.7 | · | view |
| Madracis auretenra | Hexacorallia | cnidaria_odb12 | 94.9 | 70.5 | 24.4 | 2.3 | 2.9 | · | view |
| Xenia sp. Carnegie-2017 | Octocorallia | cnidaria_odb12 | 94.6 | 73.5 | 21.1 | 2.5 | 3.0 | · | view |
| Eunicella cavolini | Octocorallia | cnidaria_odb12 | 94.4 | 60.0 | 34.4 | 3.5 | 2.0 | · | view |
| Clytia hemisphaerica | Hydrozoa | cnidaria_odb12 | 94.3 | 76.2 | 18.0 | 2.4 | 3.3 | · | view |
| Diadumene lineata | Hexacorallia | cnidaria_odb12 | 94.1 | 65.8 | 28.3 | 3.9 | 2.0 | · | view |
| Actinia equina | Hexacorallia | cnidaria_odb12 | 92.9 | 51.5 | 41.4 | 5.0 | 2.2 | · | view |
| Heliopora coerulea | Octocorallia | cnidaria_odb12 | 92.9 | 42.2 | 50.7 | 4.6 | 2.6 | · | view |
| Eunicella verrucosa | Octocorallia | cnidaria_odb12 | 92.3 | 58.1 | 34.2 | 4.3 | 3.3 | · | view |
| Hydractinia echinata | Hydrozoa | cnidaria_odb12 | 92.2 | 34.9 | 57.2 | 4.8 | 3.1 | · | view |
| Echinopora horrida | Hexacorallia | cnidaria_odb12 | 92.0 | 52.0 | 39.9 | 4.5 | 3.6 | · | view |
| Hydra vulgaris | Hydrozoa | cnidaria_odb12 | 91.4 | 67.1 | 24.3 | 2.7 | 6.0 | · | view |
| Acropora pulchra | Hexacorallia | cnidaria_odb12 | 91.0 | 83.8 | 7.2 | 5.5 | 3.5 | · | view |
| Porites divaricata | Hexacorallia | cnidaria_odb12 | 90.7 | 73.0 | 17.7 | 6.9 | 2.4 | · | view |
| Stephanocoenia intersepta | Hexacorallia | cnidaria_odb12 | 90.4 | 53.0 | 37.4 | 6.2 | 3.4 | · | view |
| Siderastrea siderea | Hexacorallia | cnidaria_odb12 | 90.1 | 85.1 | 5.0 | 5.9 | 4.0 | · | view |
| Pteroeides griseum | Octocorallia | cnidaria_odb12 | 90.0 | 61.9 | 28.1 | 6.0 | 4.0 | · | view |
| Oculina patagonica | Hexacorallia | cnidaria_odb12 | 89.9 | 88.0 | 2.0 | 6.1 | 4.0 | · | view |
| Tubastraea coccinea | Hexacorallia | cnidaria_odb12 | 89.9 | 78.4 | 11.5 | 5.4 | 4.8 | · | view |
| Podabacia crustacea | Hexacorallia | cnidaria_odb12 | 89.8 | 88.6 | 1.2 | 2.8 | 7.4 | · | view |
| Palythoa mizigama | Hexacorallia | cnidaria_odb12 | 89.6 | 82.2 | 7.4 | 6.2 | 4.3 | · | view |
| Orbicella faveolata | Hexacorallia | cnidaria_odb12 | 89.6 | 72.7 | 16.8 | 8.5 | 1.9 | · | view |
| Acropora loripes | Hexacorallia | cnidaria_odb12 | 89.5 | 82.8 | 6.7 | 6.9 | 3.6 | · | view |
| Rhopilema esculentum | Scyphozoa | cnidaria_odb12 | 89.5 | 69.8 | 19.7 | 3.1 | 7.5 | · | view |
| Telmatactis stephensoni | Hexacorallia | cnidaria_odb12 | 88.6 | 57.6 | 31.0 | 8.0 | 3.4 | · | view |
| Sanderia malayensis | Scyphozoa | cnidaria_odb12 | 88.1 | 49.3 | 38.8 | 4.0 | 7.9 | · | view |
| Blastomussa wellsi BUSCO re-run | Hexacorallia | cnidaria_odb12 | 87.8 | 84.7 | 3.1 | 7.5 | 4.8 | · | view |
| Pocillopora damicornis | Hexacorallia | cnidaria_odb12 | 87.7 | 87.3 | 0.4 | 7.6 | 4.7 | · | view |
| Turbinaria reniformis | Hexacorallia | cnidaria_odb12 | 87.5 | 74.7 | 12.8 | 7.9 | 4.6 | · | view |
| Palythoa umbrosa | Hexacorallia | cnidaria_odb12 | 87.4 | 85.6 | 1.8 | 6.9 | 5.7 | · | view |
| Alvinactis idsseensis sp. Nov. | Hexacorallia | cnidaria_odb12 | 86.4 | 84.1 | 2.3 | 7.3 | 6.3 | · | view |
| Stylophora pistillata | Hexacorallia | cnidaria_odb12 | 86.2 | 85.9 | 0.3 | 7.3 | 6.4 | · | view |
| Acropora tenuis | Hexacorallia | cnidaria_odb12 | 85.7 | 85.4 | 0.3 | 8.2 | 6.1 | · | view |
| Pelagia noctiluca | Scyphozoa | cnidaria_odb12 | 85.7 | 60.6 | 25.1 | 5.8 | 8.5 | · | view |
| Dendrophyllia cribrosa BUSCO re-run | Hexacorallia | cnidaria_odb12 | 85.4 | 81.8 | 3.6 | 7.4 | 7.2 | · | view |
| Montipora efflorescens | Hexacorallia | cnidaria_odb12 | 85.2 | 54.6 | 30.6 | 10.0 | 4.8 | · | view |
| Catalaphyllia jardinei | Hexacorallia | cnidaria_odb12 | 85.1 | 48.1 | 37.1 | 10.5 | 4.3 | · | view |
| BCF (Bougainvillia cf. muscus) merged code | — | cnidaria_odb12 | 84.6 | 75.4 | 9.2 | 8.4 | 6.9 | · | view |
| Muricea muricata | Octocorallia | cnidaria_odb12 | 84.3 | 77.3 | 7.0 | 8.1 | 7.7 | · | view |
| Turritopsis dohrnii | Hydrozoa | cnidaria_odb12 | 84.0 | 75.9 | 8.1 | 7.1 | 8.9 | · | view |
| Acropora acuminata | Hexacorallia | cnidaria_odb12 | 84.0 | 71.6 | 12.4 | 9.2 | 6.8 | · | view |
| Hemicorallium imperiale | Octocorallia | cnidaria_odb12 | 83.8 | 82.8 | 1.0 | 7.0 | 9.2 | · | view |
| Astreopora myriophthalma BUSCO re-run | Hexacorallia | cnidaria_odb12 | 83.7 | 80.5 | 3.2 | 10.0 | 6.3 | · | view |
| Candelabrum cocksii | Hydrozoa | cnidaria_odb12 | 83.7 | 54.3 | 29.4 | 5.5 | 10.8 | · | view |
| Acropora hyacinthus | Hexacorallia | cnidaria_odb12 | 83.6 | 69.8 | 13.8 | 9.4 | 7.0 | · | view |
| Acropora yongei | Hexacorallia | cnidaria_odb12 | 83.5 | 70.8 | 12.7 | 10.2 | 6.3 | · | view |
| Porites australiensis | Hexacorallia | cnidaria_odb12 | 83.4 | 69.7 | 13.7 | 10.9 | 5.7 | · | view |
| Tripedalia maipoensis | Cubozoa | cnidaria_odb12 | 83.4 | 69.8 | 13.6 | 4.9 | 11.7 | · | view |
| Exaiptasia diaphana | Hexacorallia | cnidaria_odb12 | 82.7 | 80.8 | 1.8 | 9.4 | 7.9 | · | view |
| Acropora intermedia | Hexacorallia | cnidaria_odb12 | 81.0 | 69.2 | 11.8 | 10.6 | 8.4 | · | view |
| Acropora microphthalma | Hexacorallia | cnidaria_odb12 | 80.8 | 69.1 | 11.7 | 10.9 | 8.3 | · | view |
| Acropora cytherea | Hexacorallia | cnidaria_odb12 | 80.7 | 67.8 | 12.9 | 10.9 | 8.4 | · | view |
| Catostylus mosaicus | Scyphozoa | cnidaria_odb12 | 80.6 | 59.5 | 21.1 | 8.4 | 11.0 | · | view |
| Ricordea florida | Hexacorallia | cnidaria_odb12 | 80.5 | 48.6 | 31.9 | 9.0 | 10.5 | · | view |
| Acropora florida | Hexacorallia | cnidaria_odb12 | 80.3 | 68.3 | 12.0 | 11.1 | 8.7 | · | view |
| Acropora nasuta | Hexacorallia | cnidaria_odb12 | 80.2 | 67.1 | 13.1 | 11.2 | 8.6 | · | view |
| Millepora complanata | Hydrozoa | cnidaria_odb12 | 80.2 | 59.9 | 20.4 | 6.4 | 13.4 | · | view |
| Acropora muricata | Hexacorallia | cnidaria_odb12 | 79.7 | 68.0 | 11.7 | 11.6 | 8.7 | · | view |
| Porites harrisoni | Hexacorallia | cnidaria_odb12 | 79.5 | 57.7 | 21.8 | 2.5 | 18.1 | · | view |
| Galaxea fascicularis | Hexacorallia | cnidaria_odb12 | 79.4 | 78.8 | 0.6 | 11.5 | 9.1 | · | view |
| Pachyseris speciosa | Hexacorallia | cnidaria_odb12 | 79.1 | 76.8 | 2.3 | 12.1 | 8.8 | · | view |
| Acropora awi | Hexacorallia | cnidaria_odb12 | 79.1 | 66.7 | 12.4 | 12.3 | 8.7 | · | view |
| Acropora echinata | Hexacorallia | cnidaria_odb12 | 79.0 | 66.3 | 12.6 | 12.4 | 8.6 | · | view |
| Acropora gemmifera | Hexacorallia | cnidaria_odb12 | 78.8 | 65.8 | 13.0 | 12.3 | 8.9 | · | view |
| Acropora selago | Hexacorallia | cnidaria_odb12 | 78.7 | 66.8 | 11.9 | 12.4 | 8.9 | · | view |
| Paramuricea clavata | Octocorallia | cnidaria_odb12 | 78.5 | 64.6 | 13.9 | 17.4 | 4.1 | · | view |
| Hydra viridissima BUSCO re-run | Hydrozoa | cnidaria_odb12 | 77.9 | 74.3 | 3.6 | 10.5 | 11.6 | · | view |
| Acropora cervicornis | Hexacorallia | cnidaria_odb12 | 77.8 | 77.2 | 0.6 | 14.3 | 7.9 | · | view |
| Turritopsis rubra BUSCO re-run | Hydrozoa | cnidaria_odb12 | 77.6 | 74.9 | 2.7 | 11.7 | 10.6 | · | view |
| Acropora hemprichii | Hexacorallia | cnidaria_odb12 | 75.3 | 72.1 | 3.3 | 15.5 | 9.2 | · | view |
| Nemopilema nomurai BUSCO re-run | Scyphozoa | cnidaria_odb12 | 74.3 | 68.7 | 5.6 | 9.3 | 16.4 | · | view |
| Montipora cactus BUSCO re-run | Hexacorallia | cnidaria_odb12 | 74.1 | 70.8 | 3.3 | 15.7 | 10.1 | · | view |
| Scolanthus callimorphus | Hexacorallia | cnidaria_odb12 | 74.0 | 60.0 | 14.1 | 14.8 | 11.2 | · | view |
| Haliclystus octoradiatus BUSCO re-run | Staurozoa | cnidaria_odb12 | 73.5 | 71.4 | 2.1 | 9.2 | 17.3 | · | view |
| Leptoseris scabra | Hexacorallia | cnidaria_odb12 | 73.3 | 70.0 | 3.4 | 5.6 | 21.0 | · | view |
| Hydra oligactis | Hydrozoa | cnidaria_odb12 | 73.2 | 66.0 | 7.2 | 13.3 | 13.5 | · | view |
| Desmophyllum pertusum | — | cnidaria_odb12 | 71.4 | 70.5 | 0.9 | 21.6 | 7.0 | · | view |
| Lophelia pertusa | Hexacorallia | cnidaria_odb12 | 71.4 | 70.5 | 0.9 | 21.6 | 7.0 | · | view |
| Paraphelliactis xishaensis sp. nov. | Hexacorallia | cnidaria_odb12 | 70.8 | 69.8 | 0.9 | 18.0 | 11.3 | · | view |
| AAURI (Aurelia aurita + Aurelia aurita complex sp. Pacific) merged code | — | cnidaria_odb12 | 70.4 | 35.9 | 34.4 | 14.4 | 15.2 | · | view |
| Mastigias papua | Scyphozoa | cnidaria_odb12 | 70.0 | 66.3 | 3.6 | 11.4 | 18.6 | · | view |
| Morbakka virulenta | Cubozoa | cnidaria_odb12 | 69.8 | 56.1 | 13.7 | 12.9 | 17.3 | · | view |
| Millepora dichotoma | Hydrozoa | cnidaria_odb12 | 66.7 | 48.2 | 18.5 | 11.5 | 21.8 | · | view |
| Montipora capitata | Hexacorallia | cnidaria_odb12 | 63.3 | 62.7 | 0.5 | 15.4 | 21.3 | · | view |
| Nanomia septata | Hydrozoa | cnidaria_odb12 | 58.5 | 51.7 | 6.8 | 8.1 | 33.5 | · | view |
| Millepora alcicornis | Hydrozoa | cnidaria_odb12 | 53.9 | 48.6 | 5.3 | 15.8 | 30.4 | · | view |
| Chrysaora quinquecirrha | Scyphozoa | cnidaria_odb12 | 38.7 | 33.4 | 5.3 | 10.3 | 51.0 | · | view |
| Cassiopea xamachana | Scyphozoa | cnidaria_odb12 | 37.3 | 35.2 | 2.2 | 13.4 | 49.3 | · | view |
| Aurelia coerulea | Scyphozoa | cnidaria_odb12 | 36.6 | 35.9 | 0.7 | 2.0 | 61.5 | · | view |
| Montipora grisea | Hexacorallia | cnidaria_odb12 | 32.8 | 29.3 | 3.5 | 4.9 | 62.2 | · | view |
| Trachythela sp. YZ-2020 | Octocorallia | cnidaria_odb12 | 32.2 | 31.3 | 0.9 | 3.9 | 63.9 | · | view |
| Edwardsia elegans | Hexacorallia | cnidaria_odb12 | 21.0 | 20.3 | 0.8 | 7.5 | 71.5 | · | view |
C = complete (single-copy + duplicated), S = single-copy complete, D = duplicated, F = fragmented, M = missing; all as a percentage of the 3,203 lineage BUSCOs. Rows marked merged code or isoforms are not comparable with the rest — open the species for the explanation.
