Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 52 gene–annotation pairs matching PF18049 across 148 genomes · 44 ms.

Species with hits:Pocillopora verrucosa 7Telmatactis stephensoni 6Porites cylindrica 2Blastomussa wellsi 2Actinia mediterranea 2Porites lutea 1Porites compressa 1Pocillopora damicornis 1Porites evermanni 1Porites lobata 1Porites rus 1Pocillopora meandrina 1Plumapathes pennacea 1Platygyra sinensis 1Paraphelliactis xishaensis sp. nov. 1Rhodactis osculifera 1Scolanthus callimorphus 1Stylophora pistillata 1Porites australiensis 1Actinoscyphia liui 1Pocillopora acuta 1Desmophyllum pertusum 1Astrangia poculata 1Actinia tenebrosa 1Colpophyllia natans 1Chrysogorgia sp. JL179-B06 1Dendrophyllia cribrosa 1Dendrogyra cylindrus 1Exaiptasia diaphana 1Orbicella franksi 1Edwardsia elegans 1Echinopora horrida 1Eunicella verrucosa 1Lophelia pertusa 1Leptogorgia sarmentosa 1Madracis senaria 1Oculina arbuscula 1Oculina patagonica 1
SpeciesGene IDPfam termMatchSourceBrowser
Actinoscyphia liuigene18821.t1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Actinia mediterraneaENSQPTP00000002688.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Actinia mediterraneaENSQPTP00000045388.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Astrangia poculataevm.model.Ap2.137PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Actinia tenebrosaXP_031574426.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Blastomussa wellsiBRAKERLUSP00000013646.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Blastomussa wellsiBRAKERLUSP00000013647.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Colpophyllia natansFUN_016547-T1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Chrysogorgia sp. JL179-B06Csp0G100890PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Dendrophyllia cribrosaBRAKERRLHP00000002575.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Dendrogyra cylindrusFUN_009604-T1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Desmophyllum pertusumKAJ7378864.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Exaiptasia diaphanaKXJ23055.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Edwardsia elegansjg16207.t1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Echinopora horridaENSJVNP00000027751.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Eunicella verrucosaENSNOVP00005036409.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Lophelia pertusaOS493_020466-T1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Leptogorgia sarmentosaENSAPQP00000033355.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Madracis senariaENSVTRP00000019409.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Oculina arbusculaENSPTBP00000019250.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Orbicella franksiXP_081311519.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Oculina patagonicaKAL9982361.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g21693.t1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites australiensispaus_s0004.g86.t1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites compressaPorites_compressa_HIv1___RNAseq.g14206.t1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites cylindricaENSZOFP00000023641.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites cylindricaENSZOFP00000023661.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora damicornisRMX47437.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites evermanniCAH3015499.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites lobataENSNQRP00000021580.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites luteaXP_073241710.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora meandrinaCAH3139547.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Plumapathes pennaceaENSDKPP00000010703.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Porites rusENSGYQP00005032243.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Platygyra sinensisevm.model.scaffold_33741.3PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora verrucosaXP_066024782.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora verrucosaXP_066024772.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora verrucosaXP_066024774.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora verrucosaXP_066024763.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora verrucosaXP_066024767.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora verrucosaXP_066024779.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Pocillopora verrucosaXP_066024770.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Paraphelliactis xishaensis sp. nov.HK74SY85_g3915PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000005024.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.11924.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Stylophora pistillataPFX21577.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Telmatactis stephensoniBRAKERFUXP00000048244.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Telmatactis stephensoniBRAKERFUXP00000048242.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Telmatactis stephensoniBRAKERFUXP00000010535.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Telmatactis stephensoniBRAKERFUXP00000048243.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Telmatactis stephensoniBRAKERFUXP00000010537.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse
Telmatactis stephensoniBRAKERFUXP00000010536.1PF18049DNA polymerase nu pseudo-exoInterproscanJBrowse

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