← Back to the gene family browser
This orthogroup contains 180 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 180 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22792 | LUPUS LA PROTEIN-RELATED | 149 / 180 | 82.8% | 99.3% of 150 | ≥80% support |
| Pfam | PF05383 | La | 149 / 180 | 82.8% | 97.4% of 153 | ≥80% support |
| Pfam | PF12901 | SUZ-C | 147 / 180 | 81.7% | 96.1% of 153 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 149 / 180 | 82.8% | 98.7% of 151 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 149 / 180 | 82.8% | 98.7% of 151 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 149 / 180 | 82.8% | 98.7% of 151 | ≥80% support |
| GO | GO:0005844 Cellular Component | obsolete polysome | 149 / 180 | 82.8% | 98.7% of 151 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 131 / 180 | 72.8% | 86.8% of 151 | ≥50% support |
| GO | GO:0006396 Biological Process | RNA processing | 125 / 180 | 69.4% | 82.8% of 151 | ≥50% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 125 / 180 | 69.4% | 82.8% of 151 | ≥50% support |
| KEGG | K18733 | LARP6 — Messenger RNA biogenesis | 104 / 180 | 57.8% | 94.6% of 110 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0072.g51.t1 | XP_015751415.1 | PREDICTED: la-related protein 6-like [Acropora digitifera] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Alatina alata | Aala_g1866.t1 | XP_028412374.1 | uncharacterized protein K02A2.6-like [Dendronephthya gigantea] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Aurelia aurita | scaffold69.g40.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold1003.g2.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000000563.1 | XP_015751415.1 | PREDICTED: la-related protein 6-like [Acropora digitifera] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora awi | aawi_s0090.g36.t1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora cervicornis | KAK2554540.1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora cytherea | acyt_s0010.g33.t1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora digitifera | chr2Alt.g4797.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0019.g129.t1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Actinia equina | EGACTEQ4350029454-PA | XP_031571489.1 | la-related protein 6-like [Actinia tenebrosa] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Actinia equina | EGACTEQ4350034222-PA | XP_031571489.1 | la-related protein 6-like [Actinia tenebrosa] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora florida | aflo_s0012.g99.t1 | XP_015751415.1 | PREDICTED: la-related protein 6-like [Acropora digitifera] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora gemmifera | agem_s0105.g36.t1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora hemprichii | Ahemp_005487-T1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora hyacinthus | ahya_s0009.g103.t1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g2882 | XP_020904931.1 | la-related protein 6 [Exaiptasia diaphana] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora intermedia | aint_s0138.g25.t1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Actinoscyphia liui | gene03015.t1 | XP_020904931.1 | la-related protein 6 [Exaiptasia diaphana] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
| Acropora loripes | alor_g26520.t1 | XP_044163509.1 | la-related protein 6-like isoform X1 [Acropora millepora] | Q8BN59 La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 | JBrowse |
