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Support counts the member genes carrying the term. % of genes is that count over all 144 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 134 / 144 | 93.1% | 100.0% of 134 | ≥80% support |
| PANTHER | PTHR47279 | TRANSCRIPTION FACTOR SOX-30 | 111 / 144 | 77.1% | 82.8% of 134 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 110 / 144 | 76.4% | 98.2% of 112 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 95 / 144 | 66.0% | 84.8% of 112 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 93 / 144 | 64.6% | 83.0% of 112 | ≥50% support |
| GO | GO:1990837 Molecular Function | sequence-specific double-stranded DNA binding | 93 / 144 | 64.6% | 83.0% of 112 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0050.g20.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Alatina alata | Aala_g2279.t1 | KAG1704766.1 | hypothetical protein GQR58_003952 [Nymphon striatum] | O95935 T-box transcription factor TBX18 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Aurelia aurita | scaffold177.g26.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold236.g9.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000035034.1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora awi | aawi_s0008.g222.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora cervicornis | KAK2572372.1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Aurelia coerulea | evm.model.ptg000002l.307 | RMX55867.1 | hypothetical protein pdam_00006253 [Pocillopora damicornis] | Q90ZH7 Transcription factor Sox-18B OS=Xenopus laevis OX=8355 GN=so | JBrowse |
| Acropora cytherea | acyt_s0025.g119.t1 | XP_029212055.1 | transcription factor Sox-17-beta.1-like [Acropora millepora] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora digitifera | chr3Alt.g5668.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0015.g20.t1 | XP_029212055.1 | transcription factor Sox-17-beta.1-like [Acropora millepora] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Actinia equina | EGACTEQ4350005544-PA | XP_031566986.1 | transcription factor Sox-8-like, partial [Actinia tenebrosa] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Actinia equina | EGACTEQ4350028861-PA | XP_031566986.1 | transcription factor Sox-8-like, partial [Actinia tenebrosa] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora florida | aflo_s0145.g21.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora gemmifera | agem_s0042.g98.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora hemprichii | Ahemp_001207-T1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora hyacinthus | ahya_s0012.g85.t1 | XP_029212055.1 | transcription factor Sox-17-beta.1-like [Acropora millepora] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g26523 | XP_020912707.2 | transcription factor egl-13 [Exaiptasia diaphana] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Acropora intermedia | aint_s0099.g107.t1 | XP_015762491.1 | PREDICTED: uncharacterized protein LOC107341562 [Acropora digitifera] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
| Actinoscyphia liui | gene18881.t1 | XP_020912707.2 | transcription factor egl-13 [Exaiptasia diaphana] | O94993 Transcription factor SOX-30 OS=Homo sapiens OX=9606 GN=SOX30 | JBrowse |
