Benchmarking Universal Single-Copy Ortholog (BUSCO) genes were identified for all cnidaria species. You can select different class or species to see details such as the busco id, gene id, status and length. Detailed gene structure and sequences are shown in JBrowse.
BUSCO completeness was re-tabulated for every species from the raw hit table, counting each BUSCO once per species rather than counting hit rows, and scored against the cnidaria_odb12 lineage (3,203 BUSCOs). 14 of 142 species meet the high-quality threshold (C ≥ 90 %, D ≤ 10 %, F ≤ 5 %). The core ortholog resource is built from the 14 annotated genomes in this set.
| Species | Class | Lineage | C (%) | S (%) | D (%) | F (%) | M (%) | Quality | BUSCO details |
|---|---|---|---|---|---|---|---|---|---|
| Pocillopora acuta | Hexacorallia | cnidaria_odb12 | 97.8 | 96.2 | 1.5 | 1.7 | 0.5 | ✓ | view |
| Pocillopora meandrina | Hexacorallia | cnidaria_odb12 | 96.2 | 94.3 | 1.9 | 1.9 | 1.9 | ✓ | view |
| Colpophyllia natans | Hexacorallia | cnidaria_odb12 | 95.8 | 89.8 | 6.0 | 2.7 | 1.5 | ✓ | view |
| Actinia mediterranea | Hexacorallia | cnidaria_odb12 | 95.6 | 94.8 | 0.8 | 1.7 | 2.7 | ✓ | view |
| Porites compressa | Hexacorallia | cnidaria_odb12 | 95.2 | 94.0 | 1.2 | 3.7 | 1.2 | ✓ | view |
| Porites evermanni | Hexacorallia | cnidaria_odb12 | 95.1 | 89.1 | 6.0 | 3.7 | 1.3 | ✓ | view |
| Dendrogyra cylindrus | Hexacorallia | cnidaria_odb12 | 95.1 | 87.1 | 7.9 | 3.0 | 2.0 | ✓ | view |
| Fimbriaphyllia ancora | Hexacorallia | cnidaria_odb12 | 94.2 | 93.6 | 0.6 | 1.9 | 3.9 | ✓ | view |
| Paragorgia papillata | Octocorallia | cnidaria_odb12 | 93.9 | 91.5 | 2.3 | 4.1 | 2.0 | ✓ | view |
| Acropora digitifera | Hexacorallia | cnidaria_odb12 | 92.9 | 84.8 | 8.1 | 4.2 | 3.0 | ✓ | view |
| Hydractinia symbiolongicarpus | Hydrozoa | cnidaria_odb12 | 92.7 | 88.3 | 4.4 | 2.8 | 4.6 | ✓ | view |
| Callogorgia gracilis | Octocorallia | cnidaria_odb12 | 91.6 | 90.9 | 0.7 | 4.7 | 3.7 | ✓ | view |
| Astrangia poculata | Hexacorallia | cnidaria_odb12 | 91.4 | 86.6 | 4.8 | 4.7 | 3.9 | ✓ | view |
| Actinoscyphia liui | Hexacorallia | cnidaria_odb12 | 91.3 | 81.7 | 9.5 | 4.3 | 4.5 | ✓ | view |
| Acropora palmata | Hexacorallia | cnidaria_odb12 | 99.7 | 71.5 | 28.2 | 0.1 | 0.2 | · | view |
| Orbicella franksi | Hexacorallia | cnidaria_odb12 | 99.4 | 75.7 | 23.8 | 0.3 | 0.3 | · | view |
| Nematostella vectensis | Hexacorallia | cnidaria_odb12 | 99.3 | 71.7 | 27.7 | 0.2 | 0.5 | · | view |
| Porites lutea | Hexacorallia | cnidaria_odb12 | 98.9 | 78.3 | 20.6 | 0.4 | 0.7 | · | view |
| Actinia tenebrosa | Hexacorallia | cnidaria_odb12 | 98.7 | 80.8 | 17.9 | 1.0 | 0.3 | · | view |
| Montipora foliosa | Hexacorallia | cnidaria_odb12 | 98.6 | 70.4 | 28.2 | 0.4 | 1.0 | · | view |
| Pocillopora verrucosa | Hexacorallia | cnidaria_odb12 | 98.6 | 77.4 | 21.2 | 0.5 | 0.9 | · | view |
| Dendronephthya gigantea | Octocorallia | cnidaria_odb12 | 98.0 | 76.2 | 21.8 | 0.8 | 1.2 | · | view |
| Acropora millepora | Hexacorallia | cnidaria_odb12 | 97.9 | 70.7 | 27.3 | 0.4 | 1.6 | · | view |
| Anthopleura xanthogrammica | Hexacorallia | cnidaria_odb12 | 97.9 | 54.8 | 43.1 | 1.3 | 0.8 | · | view |
| Montipora capricornis | Hexacorallia | cnidaria_odb12 | 97.9 | 69.3 | 28.7 | 0.6 | 1.5 | · | view |
| Paracondylactis sinensis | Hexacorallia | cnidaria_odb12 | 97.6 | 80.0 | 17.6 | 1.1 | 1.3 | · | view |
| Porites lobata | Hexacorallia | cnidaria_odb12 | 97.6 | 51.1 | 46.5 | 1.3 | 1.2 | · | view |
| Plumapathes pennacea | Hexacorallia | cnidaria_odb12 | 97.5 | 57.1 | 40.4 | 1.5 | 1.0 | · | view |
| Meandrina meandrites | Hexacorallia | cnidaria_odb12 | 97.4 | 71.4 | 26.0 | 1.5 | 1.1 | · | view |
| Metridium senile | Hexacorallia | cnidaria_odb12 | 97.4 | 68.3 | 29.0 | 1.4 | 1.2 | · | view |
| Oculina arbuscula | Hexacorallia | cnidaria_odb12 | 97.4 | 67.9 | 29.5 | 1.3 | 1.3 | · | view |
| Duncanopsammia axifuga | Hexacorallia | cnidaria_odb12 | 97.0 | 56.8 | 40.2 | 1.8 | 1.1 | · | view |
| Porites rus | Hexacorallia | cnidaria_odb12 | 97.0 | 65.1 | 31.9 | 1.7 | 1.3 | · | view |
| Acropora spathulata | Hexacorallia | cnidaria_odb12 | 96.9 | 46.6 | 50.4 | 1.7 | 1.3 | · | view |
| Madracis senaria | Hexacorallia | cnidaria_odb12 | 96.9 | 69.1 | 27.8 | 1.8 | 1.3 | · | view |
| Condylactis gigantea | Hexacorallia | cnidaria_odb12 | 96.6 | 58.9 | 37.7 | 1.6 | 1.8 | · | view |
| Leptogorgia sarmentosa | Octocorallia | cnidaria_odb12 | 96.6 | 45.9 | 50.7 | 2.2 | 1.3 | · | view |
| Acropora austera | Hexacorallia | cnidaria_odb12 | 96.4 | 50.6 | 45.8 | 2.1 | 1.5 | · | view |
| Siderastrea radians | Hexacorallia | cnidaria_odb12 | 96.2 | 45.9 | 50.3 | 2.2 | 1.6 | · | view |
| Micromussa lordhowensis | Hexacorallia | cnidaria_odb12 | 96.1 | 66.9 | 29.2 | 2.4 | 1.5 | · | view |
| Rhodactis osculifera | Hexacorallia | cnidaria_odb12 | 95.9 | 63.7 | 32.2 | 2.5 | 1.7 | · | view |
| Porites cylindrica | Hexacorallia | cnidaria_odb12 | 95.3 | 70.8 | 24.5 | 2.5 | 2.2 | · | view |
| Cyphastrea salae | Hexacorallia | cnidaria_odb12 | 95.3 | 69.6 | 25.7 | 3.0 | 1.7 | · | view |
| Madracis auretenra | Hexacorallia | cnidaria_odb12 | 94.9 | 70.5 | 24.4 | 2.3 | 2.9 | · | view |
| Xenia sp. Carnegie-2017 | Octocorallia | cnidaria_odb12 | 94.6 | 73.5 | 21.1 | 2.5 | 3.0 | · | view |
| Eunicella cavolini | Octocorallia | cnidaria_odb12 | 94.4 | 60.0 | 34.4 | 3.5 | 2.0 | · | view |
| Clytia hemisphaerica | Hydrozoa | cnidaria_odb12 | 94.3 | 76.2 | 18.0 | 2.4 | 3.3 | · | view |
| Diadumene lineata | Hexacorallia | cnidaria_odb12 | 94.1 | 65.8 | 28.3 | 3.9 | 2.0 | · | view |
| Actinia equina | Hexacorallia | cnidaria_odb12 | 92.9 | 51.5 | 41.4 | 5.0 | 2.2 | · | view |
| Heliopora coerulea | Octocorallia | cnidaria_odb12 | 92.9 | 42.2 | 50.7 | 4.6 | 2.6 | · | view |
| Eunicella verrucosa | Octocorallia | cnidaria_odb12 | 92.3 | 58.1 | 34.2 | 4.3 | 3.3 | · | view |
| Hydractinia echinata | Hydrozoa | cnidaria_odb12 | 92.2 | 34.9 | 57.2 | 4.8 | 3.1 | · | view |
| Echinopora horrida | Hexacorallia | cnidaria_odb12 | 92.0 | 52.0 | 39.9 | 4.5 | 3.6 | · | view |
| Hydra vulgaris | Hydrozoa | cnidaria_odb12 | 91.4 | 67.1 | 24.3 | 2.7 | 6.0 | · | view |
| Chrysogorgia sp. JL179-B06 | Octocorallia | cnidaria_odb12 | 91.0 | 88.7 | 2.3 | 5.1 | 3.9 | · | view |
| Acropora pulchra | Hexacorallia | cnidaria_odb12 | 91.0 | 83.8 | 7.2 | 5.5 | 3.5 | · | view |
| Porites divaricata | Hexacorallia | cnidaria_odb12 | 90.7 | 73.0 | 17.7 | 6.9 | 2.4 | · | view |
| Stephanocoenia intersepta | Hexacorallia | cnidaria_odb12 | 90.4 | 53.0 | 37.4 | 6.2 | 3.4 | · | view |
| Siderastrea siderea | Hexacorallia | cnidaria_odb12 | 90.1 | 85.1 | 5.0 | 5.9 | 4.0 | · | view |
| Pteroeides griseum | Octocorallia | cnidaria_odb12 | 90.0 | 61.9 | 28.1 | 6.0 | 4.0 | · | view |
| Oculina patagonica | Hexacorallia | cnidaria_odb12 | 89.9 | 88.0 | 2.0 | 6.1 | 4.0 | · | view |
| Cladopsammia gracilis | Hexacorallia | cnidaria_odb12 | 89.9 | 81.9 | 8.0 | 6.9 | 3.2 | · | view |
| Tubastraea coccinea | Hexacorallia | cnidaria_odb12 | 89.9 | 78.4 | 11.5 | 5.4 | 4.8 | · | view |
| Podabacia crustacea | Hexacorallia | cnidaria_odb12 | 89.8 | 88.6 | 1.2 | 2.8 | 7.4 | · | view |
| Palythoa mizigama | Hexacorallia | cnidaria_odb12 | 89.6 | 82.2 | 7.4 | 6.2 | 4.3 | · | view |
| Orbicella faveolata | Hexacorallia | cnidaria_odb12 | 89.6 | 72.7 | 16.8 | 8.5 | 1.9 | · | view |
| Acropora loripes | Hexacorallia | cnidaria_odb12 | 89.5 | 82.8 | 6.7 | 6.9 | 3.6 | · | view |
| Rhopilema esculentum | Scyphozoa | cnidaria_odb12 | 89.5 | 69.8 | 19.7 | 3.1 | 7.5 | · | view |
| Telmatactis stephensoni | Hexacorallia | cnidaria_odb12 | 88.6 | 57.6 | 31.0 | 8.0 | 3.4 | · | view |
| Sanderia malayensis | Scyphozoa | cnidaria_odb12 | 88.1 | 49.3 | 38.8 | 4.0 | 7.9 | · | view |
| Blastomussa wellsi | Hexacorallia | cnidaria_odb12 | 87.8 | 84.7 | 3.1 | 7.5 | 4.8 | · | view |
| Pocillopora damicornis | Hexacorallia | cnidaria_odb12 | 87.7 | 87.3 | 0.4 | 7.6 | 4.7 | · | view |
| Turbinaria reniformis | Hexacorallia | cnidaria_odb12 | 87.5 | 74.7 | 12.8 | 7.9 | 4.6 | · | view |
| Palythoa umbrosa | Hexacorallia | cnidaria_odb12 | 87.4 | 85.6 | 1.8 | 6.9 | 5.7 | · | view |
| Actinernus sp. WN-2022 | Hexacorallia | cnidaria_odb12 | 87.2 | 83.0 | 4.3 | 7.6 | 5.2 | · | view |
| Alvinactis idsseensis sp. Nov. | Hexacorallia | cnidaria_odb12 | 86.4 | 84.1 | 2.3 | 7.3 | 6.3 | · | view |
| Stylophora pistillata | Hexacorallia | cnidaria_odb12 | 86.2 | 85.9 | 0.3 | 7.3 | 6.4 | · | view |
| Acropora tenuis | Hexacorallia | cnidaria_odb12 | 85.7 | 85.4 | 0.3 | 8.2 | 6.1 | · | view |
| Pelagia noctiluca | Scyphozoa | cnidaria_odb12 | 85.7 | 60.6 | 25.1 | 5.8 | 8.5 | · | view |
| Dendrophyllia cribrosa | Hexacorallia | cnidaria_odb12 | 85.4 | 81.8 | 3.6 | 7.4 | 7.2 | · | view |
| Montipora efflorescens | Hexacorallia | cnidaria_odb12 | 85.2 | 54.6 | 30.6 | 10.0 | 4.8 | · | view |
| Catalaphyllia jardinei | Hexacorallia | cnidaria_odb12 | 85.1 | 48.1 | 37.1 | 10.5 | 4.3 | · | view |
| Bougainvillia cf. muscus | Hydrozoa | cnidaria_odb12 | 84.7 | 76.5 | 8.2 | 8.4 | 6.9 | · | view |
| Muricea muricata | Octocorallia | cnidaria_odb12 | 84.3 | 77.3 | 7.0 | 8.1 | 7.7 | · | view |
| Turritopsis dohrnii | Hydrozoa | cnidaria_odb12 | 84.0 | 75.9 | 8.1 | 7.1 | 8.9 | · | view |
| Acropora acuminata | Hexacorallia | cnidaria_odb12 | 84.0 | 71.6 | 12.4 | 9.2 | 6.8 | · | view |
| Hemicorallium imperiale | Octocorallia | cnidaria_odb12 | 83.8 | 82.8 | 1.0 | 7.0 | 9.2 | · | view |
| Astreopora myriophthalma | Hexacorallia | cnidaria_odb12 | 83.7 | 80.5 | 3.2 | 10.0 | 6.3 | · | view |
| Candelabrum cocksii | Hydrozoa | cnidaria_odb12 | 83.7 | 54.3 | 29.4 | 5.5 | 10.8 | · | view |
| Acropora hyacinthus | Hexacorallia | cnidaria_odb12 | 83.6 | 69.8 | 13.8 | 9.4 | 7.0 | · | view |
| Acropora yongei | Hexacorallia | cnidaria_odb12 | 83.5 | 70.8 | 12.7 | 10.2 | 6.3 | · | view |
| Porites australiensis | Hexacorallia | cnidaria_odb12 | 83.4 | 69.7 | 13.7 | 10.9 | 5.7 | · | view |
| Tripedalia maipoensis | Cubozoa | cnidaria_odb12 | 83.4 | 69.8 | 13.6 | 4.9 | 11.7 | · | view |
| Exaiptasia diaphana | Hexacorallia | cnidaria_odb12 | 82.7 | 80.8 | 1.8 | 9.4 | 7.9 | · | view |
| Cassiopea sp. PORT0000214 | Scyphozoa | cnidaria_odb12 | 81.9 | 80.9 | 1.1 | 7.0 | 11.1 | · | view |
| Acropora intermedia | Hexacorallia | cnidaria_odb12 | 81.0 | 69.2 | 11.8 | 10.6 | 8.4 | · | view |
| Acropora microphthalma | Hexacorallia | cnidaria_odb12 | 80.8 | 69.1 | 11.7 | 10.9 | 8.3 | · | view |
| Acropora cytherea | Hexacorallia | cnidaria_odb12 | 80.7 | 67.8 | 12.9 | 10.9 | 8.4 | · | view |
| Catostylus mosaicus | Scyphozoa | cnidaria_odb12 | 80.6 | 59.5 | 21.1 | 8.4 | 11.0 | · | view |
| Ricordea florida | Hexacorallia | cnidaria_odb12 | 80.5 | 48.6 | 31.9 | 9.0 | 10.5 | · | view |
| Acropora florida | Hexacorallia | cnidaria_odb12 | 80.3 | 68.3 | 12.0 | 11.1 | 8.7 | · | view |
| Acropora nasuta | Hexacorallia | cnidaria_odb12 | 80.2 | 67.1 | 13.1 | 11.2 | 8.6 | · | view |
| Millepora complanata | Hydrozoa | cnidaria_odb12 | 80.2 | 59.9 | 20.4 | 6.4 | 13.4 | · | view |
| Acropora muricata | Hexacorallia | cnidaria_odb12 | 79.7 | 68.0 | 11.7 | 11.6 | 8.7 | · | view |
| Porites harrisoni | Hexacorallia | cnidaria_odb12 | 79.5 | 57.7 | 21.8 | 2.5 | 18.1 | · | view |
| Galaxea fascicularis | Hexacorallia | cnidaria_odb12 | 79.4 | 78.8 | 0.6 | 11.5 | 9.1 | · | view |
| Pachyseris speciosa | Hexacorallia | cnidaria_odb12 | 79.1 | 76.8 | 2.3 | 12.1 | 8.8 | · | view |
| Acropora awi | Hexacorallia | cnidaria_odb12 | 79.1 | 66.7 | 12.4 | 12.3 | 8.7 | · | view |
| Acropora echinata | Hexacorallia | cnidaria_odb12 | 79.0 | 66.3 | 12.6 | 12.4 | 8.6 | · | view |
| Acropora gemmifera | Hexacorallia | cnidaria_odb12 | 78.8 | 65.8 | 13.0 | 12.3 | 8.9 | · | view |
| Acropora selago | Hexacorallia | cnidaria_odb12 | 78.7 | 66.8 | 11.9 | 12.4 | 8.9 | · | view |
| Paramuricea clavata | Octocorallia | cnidaria_odb12 | 78.5 | 64.6 | 13.9 | 17.4 | 4.1 | · | view |
| Hydra viridissima | Hydrozoa | cnidaria_odb12 | 77.9 | 74.3 | 3.6 | 10.5 | 11.6 | · | view |
| Acropora cervicornis | Hexacorallia | cnidaria_odb12 | 77.8 | 77.2 | 0.6 | 14.3 | 7.9 | · | view |
| Turritopsis rubra | Hydrozoa | cnidaria_odb12 | 77.6 | 74.9 | 2.7 | 11.7 | 10.6 | · | view |
| Aurelia sp. 4 Dawson et al 2005 | Scyphozoa | cnidaria_odb12 | 76.0 | 75.0 | 1.0 | 11.1 | 12.9 | · | view |
| Acropora hemprichii | Hexacorallia | cnidaria_odb12 | 75.3 | 72.1 | 3.3 | 15.5 | 9.2 | · | view |
| Nemopilema nomurai | Scyphozoa | cnidaria_odb12 | 74.3 | 68.7 | 5.6 | 9.3 | 16.4 | · | view |
| Montipora cactus | Hexacorallia | cnidaria_odb12 | 74.1 | 70.8 | 3.3 | 15.7 | 10.1 | · | view |
| Scolanthus callimorphus | Hexacorallia | cnidaria_odb12 | 74.0 | 60.0 | 14.1 | 14.8 | 11.2 | · | view |
| Haliclystus octoradiatus | Staurozoa | cnidaria_odb12 | 73.5 | 71.4 | 2.1 | 9.2 | 17.3 | · | view |
| Leptoseris scabra | Hexacorallia | cnidaria_odb12 | 73.3 | 70.0 | 3.4 | 5.6 | 21.0 | · | view |
| Hydra oligactis | Hydrozoa | cnidaria_odb12 | 73.2 | 66.0 | 7.2 | 13.3 | 13.5 | · | view |
| Desmophyllum pertusum | Hexacorallia | cnidaria_odb12 | 71.4 | 70.5 | 0.9 | 21.6 | 7.0 | · | view |
| Lophelia pertusa | Hexacorallia | cnidaria_odb12 | 71.4 | 70.5 | 0.9 | 21.6 | 7.0 | · | view |
| Paraphelliactis xishaensis sp. nov. | Hexacorallia | cnidaria_odb12 | 70.8 | 69.8 | 0.9 | 18.0 | 11.3 | · | view |
| Mastigias papua | Scyphozoa | cnidaria_odb12 | 70.0 | 66.3 | 3.6 | 11.4 | 18.6 | · | view |
| Morbakka virulenta | Cubozoa | cnidaria_odb12 | 69.8 | 56.1 | 13.7 | 12.9 | 17.3 | · | view |
| Millepora dichotoma | Hydrozoa | cnidaria_odb12 | 66.7 | 48.2 | 18.5 | 11.5 | 21.8 | · | view |
| Montipora capitata | Hexacorallia | cnidaria_odb12 | 63.3 | 62.7 | 0.5 | 15.4 | 21.3 | · | view |
| Aurelia aurita | Scyphozoa | cnidaria_odb12 | 60.0 | 49.2 | 10.8 | 17.3 | 22.7 | · | view |
| Nanomia septata | Hydrozoa | cnidaria_odb12 | 58.5 | 51.7 | 6.8 | 8.1 | 33.5 | · | view |
| Platygyra sinensis | Hexacorallia | cnidaria_odb12 | 56.8 | 52.4 | 4.4 | 24.7 | 18.5 | · | view |
| Millepora alcicornis | Hydrozoa | cnidaria_odb12 | 53.9 | 48.6 | 5.3 | 15.8 | 30.4 | · | view |
| Actinostola sp. cb2023 | Hexacorallia | cnidaria_odb12 | 44.7 | 43.6 | 1.0 | 21.4 | 33.9 | · | view |
| Chrysaora quinquecirrha | Scyphozoa | cnidaria_odb12 | 38.7 | 33.4 | 5.3 | 10.3 | 51.0 | · | view |
| Cassiopea xamachana | Scyphozoa | cnidaria_odb12 | 37.3 | 35.2 | 2.2 | 13.4 | 49.3 | · | view |
| Aurelia coerulea | Scyphozoa | cnidaria_odb12 | 36.6 | 35.9 | 0.7 | 2.0 | 61.5 | · | view |
| Aurelia aurita complex sp. Pacific | Scyphozoa | cnidaria_odb12 | 34.5 | 28.5 | 6.0 | 16.1 | 49.5 | · | view |
| Montipora grisea | Hexacorallia | cnidaria_odb12 | 32.8 | 29.3 | 3.5 | 4.9 | 62.2 | · | view |
| Trachythela sp. YZ-2020 | Octocorallia | cnidaria_odb12 | 32.2 | 31.3 | 0.9 | 3.9 | 63.9 | · | view |
| Edwardsia elegans | Hexacorallia | cnidaria_odb12 | 21.0 | 20.3 | 0.8 | 7.5 | 71.5 | · | view |
C = complete (single-copy + duplicated), S = single-copy complete, D = duplicated, F = fragmented, M = missing; all as a percentage of the 3,203 lineage BUSCOs. One row per species, and every row is a species with a deposited protein sequence set, scored on that set — so the rows are directly comparable with each other. Species whose genome has no annotation are not listed here; their completeness is reported on the species page instead.
