Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 64 gene–annotation pairs matching PF11798 across 148 genomes · 6158 ms.

Species with hits:PVERR 4 HOLIG 4 TSTEP 3 HCOER 2 SPIST 2 SMALA 2 SINTE 2 PMEAN 2 PGRIS 2 PDAMI 2 PACUT 2 HSYMB 2 MDICH 2 EDIAP 2 AMEDI 2 CMOSA 2 ASP3 2 AXANT 1 TMAIP 1 ASP1 1 RFLOR 1 RESCU 1 PXISH 1 ATENE 1 PSINE1 1 PRUS 1 PNOCT 1 PDIVA 1 CCOCK 1 CXAMA 1 CCRUX 1 CHEMI 1 NNOMU 1 MVIRU 1 MPAPU 1 ALIUI 1 MAURE 1 HVIRI 1 CQUIN 1 HOCTO 1 HECHI 1 AAURI1 1

Species	Gene ID	Pfam term	Match	Source	Browser
AAURI1	scaffold122.g51.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
ALIUI	gene26557.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
AMEDI	ENSQPTP00000012919.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
AMEDI	ENSQPTP00000051943.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
ASP1	Acti_033123-T1	PF11798	IMS family HHH motif	Interproscan	JBrowse
ASP3	4_ENSDKXP00000012501.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
ASP3	4_ENSDKXP00000004787.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
ATENE	XP_031567842.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
AXANT	ENSOJPP00000004575.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
CCOCK	ENSQNNP00000002790.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
CCRUX	g650.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
CHEMI	XP_066911474.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
CMOSA	ENSSJYP00000012923.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
CMOSA	ENSSJYP00000012916.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
CQUIN	evm.model.HiC_scaffold_22.256	PF11798	IMS family HHH motif	Interproscan	JBrowse
CXAMA	Cxam_g11722.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
EDIAP	KXJ12461.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
EDIAP	KXJ27846.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
HCOER	ENSBQFP00000021503.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
HCOER	ENSBQFP00000021510.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
HECHI	ENSDJXP00000031296.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
HOCTO	BRAKERHOCP00005007936.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
HOLIG	HOLI01423.G1603	PF11798	IMS family HHH motif	Interproscan	JBrowse
HOLIG	HOLI02419.G8295	PF11798	IMS family HHH motif	Interproscan	JBrowse
HOLIG	HOLI00299.G46730	PF11798	IMS family HHH motif	Interproscan	JBrowse
HOLIG	HOLI01928.G28135	PF11798	IMS family HHH motif	Interproscan	JBrowse
HSYMB	HSymV2.0_g10.19002_t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
HSYMB	HSymV2.0_g09.17221_t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
HVIRI	BRAKERKREP00000009440.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
MAURE	ENSIHXP00000021846.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
MDICH	ENSYDOP00000038679.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
MDICH	ENSYDOP00000038685.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
MPAPU	BRAKERKYLP00000018349.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
MVIRU	scaffold273.g26.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000016875.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PACUT	Pocillopora_acuta_HIv2___RNAseq.g23929.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PACUT	Pocillopora_acuta_HIv2___RNAseq.g19041.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PDAMI	RMX48460.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PDAMI	RMX41411.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PDIVA	ENSHHBP00000021247.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PGRIS	ENSPYFP00000017667.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PGRIS	ENSPYFP00000017660.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PMEAN	CAH3036287.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PMEAN	CAH3044611.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PNOCT	ENSXLYP00000017800.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PRUS	ENSGYQP00005026068.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PSINE1	g12775.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PVERR	XP_058966360.2	PF11798	IMS family HHH motif	Interproscan	JBrowse
PVERR	XP_058967365.2	PF11798	IMS family HHH motif	Interproscan	JBrowse
PVERR	XP_066028703.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
PVERR	XP_058967366.2	PF11798	IMS family HHH motif	Interproscan	JBrowse
PXISH	HK74SY85_g22255	PF11798	IMS family HHH motif	Interproscan	JBrowse
RESCU	XP_065055328.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
RFLOR	ENSORFP00005004998.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
SINTE	ENSDDJP00000038198.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
SINTE	ENSDDJP00000038205.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
SMALA	ENSXQXP00000021472.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
SMALA	ENSXQXP00000021463.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
SPIST	PFX19378.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
SPIST	PFX26948.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
TMAIP	g1169.t1	PF11798	IMS family HHH motif	Interproscan	JBrowse
TSTEP	BRAKERFUXP00000051356.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
TSTEP	BRAKERFUXP00000051355.1	PF11798	IMS family HHH motif	Interproscan	JBrowse
TSTEP	BRAKERFUXP00000001424.1	PF11798	IMS family HHH motif	Interproscan	JBrowse