Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 68 gene–annotation pairs matching PF13088 across 148 genomes · 26 ms.

Species with hits:Palythoa mizigama 4Pocillopora verrucosa 3Echinopora horrida 2Anthopleura xanthogrammica 2Porites harrisoni 2Porites lobata 2Porites lutea 2Micromussa lordhowensis 2Ricordea florida 2Turbinaria reniformis 2Stephanocoenia intersepta 2Duncanopsammia axifuga 2Blastomussa wellsi 2Condylactis gigantea 2Catalaphyllia jardinei 2Scolanthus callimorphus 1Porites divaricata 1Porites evermanni 1Tubastraea coccinea 1Siderastrea siderea 1Pocillopora meandrina 1Plumapathes pennacea 1Stylophora pistillata 1Porites rus 1Palythoa umbrosa 1Porites cylindrica 1Rhodactis osculifera 1Pocillopora damicornis 1Actinernus sp. WN-2022 1Podabacia crustacea 1Madracis auretenra 1Cladopsammia gracilis 1Colpophyllia natans 1Cassiopea xamachana 1Dendrophyllia cribrosa 1Dendrogyra cylindrus 1Fimbriaphyllia ancora 1Galaxea fascicularis 1Hydra oligactis 1Montipora grisea 1Porites compressa 1Meandrina meandrites 1Madracis senaria 1Nematostella vectensis 1Oculina arbuscula 1Orbicella faveolata 1Orbicella franksi 1Oculina patagonica 1Porites australiensis 1Pocillopora acuta 1
SpeciesGene IDPfam termMatchSourceBrowser
Actinernus sp. WN-2022Acti_044481-T1PF13088BNR repeat-like domainInterproscanJBrowse
Anthopleura xanthogrammicaENSOJPP00000004938.1PF13088BNR repeat-like domainInterproscanJBrowse
Anthopleura xanthogrammicaENSOJPP00000004929.1PF13088BNR repeat-like domainInterproscanJBrowse
Blastomussa wellsiBRAKERLUSP00000030522.1PF13088BNR repeat-like domainInterproscanJBrowse
Blastomussa wellsiBRAKERLUSP00000030596.1PF13088BNR repeat-like domainInterproscanJBrowse
Condylactis giganteaENSKFPP00000029287.1PF13088BNR repeat-like domainInterproscanJBrowse
Condylactis giganteaENSKFPP00000029296.1PF13088BNR repeat-like domainInterproscanJBrowse
Cladopsammia gracilisBRAKERTYJP00000021516.1PF13088BNR repeat-like domainInterproscanJBrowse
Catalaphyllia jardineiENSAVKP00000042275.1PF13088BNR repeat-like domainInterproscanJBrowse
Catalaphyllia jardineiENSAVKP00000042271.1PF13088BNR repeat-like domainInterproscanJBrowse
Colpophyllia natansFUN_025357-T1PF13088BNR repeat-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2777.t1PF13088BNR repeat-like domainInterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000042923.1PF13088BNR repeat-like domainInterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000042929.1PF13088BNR repeat-like domainInterproscanJBrowse
Dendrophyllia cribrosaBRAKERRLHP00000019533.1PF13088BNR repeat-like domainInterproscanJBrowse
Dendrogyra cylindrusFUN_022972-T1PF13088BNR repeat-like domainInterproscanJBrowse
Echinopora horridaENSJVNP00000003865.1PF13088BNR repeat-like domainInterproscanJBrowse
Echinopora horridaENSJVNP00000003853.1PF13088BNR repeat-like domainInterproscanJBrowse
Fimbriaphyllia ancoraeanc_s041.g0101.t1PF13088BNR repeat-like domainInterproscanJBrowse
Galaxea fascicularisgfas1.m1.23367.m1PF13088BNR repeat-like domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10555PF13088BNR repeat-like domainInterproscanJBrowse
Madracis auretenraENSIHXP00000004107.1PF13088BNR repeat-like domainInterproscanJBrowse
Montipora griseaANN21086-RAPF13088BNR repeat-like domainInterproscanJBrowse
Micromussa lordhowensisENSSYXP00000000524.1PF13088BNR repeat-like domainInterproscanJBrowse
Micromussa lordhowensisENSSYXP00000000534.1PF13088BNR repeat-like domainInterproscanJBrowse
Meandrina meandritesENSVBPP00000018092.1PF13088BNR repeat-like domainInterproscanJBrowse
Madracis senariaENSVTRP00000041625.1PF13088BNR repeat-like domainInterproscanJBrowse
Nematostella vectensisXP_032234363.1PF13088BNR repeat-like domainInterproscanJBrowse
Oculina arbusculaENSPTBP00000035395.1PF13088BNR repeat-like domainInterproscanJBrowse
Orbicella faveolataXP_020605323.1PF13088BNR repeat-like domainInterproscanJBrowse
Orbicella franksiXP_081332375.1PF13088BNR repeat-like domainInterproscanJBrowse
Oculina patagonicaKAL9973903.1PF13088BNR repeat-like domainInterproscanJBrowse
Pocillopora acutaPocillopora_acuta_HIv2___RNAseq.g28036.t2PF13088BNR repeat-like domainInterproscanJBrowse
Porites australiensispaus_s0282.g36.t1PF13088BNR repeat-like domainInterproscanJBrowse
Porites compressaPorites_compressa_HIv1___RNAseq.g37857.t1PF13088BNR repeat-like domainInterproscanJBrowse
Podabacia crustaceaPcrG018542.mRNA1PF13088BNR repeat-like domainInterproscanJBrowse
Porites cylindricaENSZOFP00000003641.1PF13088BNR repeat-like domainInterproscanJBrowse
Pocillopora damicornisRMX57932.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites divaricataENSHHBP00000005619.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites evermanniCAH3028423.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites harrisoniKAM7435024.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites harrisoniKAM7435023.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites lobataENSNQRP00000002041.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites lobataENSNQRP00000002047.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites luteaXP_073252945.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites luteaXP_073252946.1PF13088BNR repeat-like domainInterproscanJBrowse
Pocillopora meandrinaCAH3115069.1PF13088BNR repeat-like domainInterproscanJBrowse
Palythoa mizigamac2497.g003.t1.p1PF13088BNR repeat-like domainInterproscanJBrowse
Palythoa mizigamac2497.g005.t1.p1PF13088BNR repeat-like domainInterproscanJBrowse
Palythoa mizigamac0280.g020.t1.p1PF13088BNR repeat-like domainInterproscanJBrowse
Palythoa mizigamac2743.g001.t1.p1PF13088BNR repeat-like domainInterproscanJBrowse
Plumapathes pennaceaENSDKPP00000001798.1PF13088BNR repeat-like domainInterproscanJBrowse
Porites rusENSGYQP00005040209.1PF13088BNR repeat-like domainInterproscanJBrowse
Palythoa umbrosac0382.g003.t1PF13088BNR repeat-like domainInterproscanJBrowse
Pocillopora verrucosaXP_058947779.1PF13088BNR repeat-like domainInterproscanJBrowse
Pocillopora verrucosaXP_058947781.1PF13088BNR repeat-like domainInterproscanJBrowse
Pocillopora verrucosaXP_058947780.1PF13088BNR repeat-like domainInterproscanJBrowse
Ricordea floridaENSORFP00005005656.1PF13088BNR repeat-like domainInterproscanJBrowse
Ricordea floridaENSORFP00005005662.1PF13088BNR repeat-like domainInterproscanJBrowse
Rhodactis osculiferaENSJQFP00000033044.1PF13088BNR repeat-like domainInterproscanJBrowse
Scolanthus callimorphusNY_Scal100_v1.1097.1PF13088BNR repeat-like domainInterproscanJBrowse
Stephanocoenia interseptaENSDDJP00000034957.1PF13088BNR repeat-like domainInterproscanJBrowse
Stephanocoenia interseptaENSDDJP00000034941.1PF13088BNR repeat-like domainInterproscanJBrowse
Stylophora pistillataPFX31321.1PF13088BNR repeat-like domainInterproscanJBrowse
Siderastrea sidereaFUN_055952-T1PF13088BNR repeat-like domainInterproscanJBrowse
Tubastraea coccineaTcoG020281.mRNA1PF13088BNR repeat-like domainInterproscanJBrowse
Turbinaria reniformisENSHNZP00000002482.1PF13088BNR repeat-like domainInterproscanJBrowse
Turbinaria reniformisENSHNZP00000002472.1PF13088BNR repeat-like domainInterproscanJBrowse

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