Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 97 gene–annotation pairs matching PF21128 across 148 genomes · 9276 ms.

Species with hits:EHORR 4 PAUST 3 ANASU 3 MCACT 2 AMYRI 2 ECAVO 2 DCRIB 2 BWELL 2 ASPAT 2 PRUS 2 PLOBA 2 PSINE2 2 RFLOR 2 TCOCC 2 SRADI 2 PCRUS 1 MMEAN 1 MMURI 1 OARBU 1 OFAVE 1 OFRAN 1 OPATA 1 PACUT 1 SSIDE 1 PCLAV 1 PCOMP 1 PCYLI 1 SPIST 1 PUMBR 1 PDAMI 1 PDIVA 1 PEVER 1 PHARR 1 MFOLI 1 SINTE 1 PLUTE 1 PMEAN 1 ROSCU 1 PMIZI 1 PPAPI 1 PVERR 1 MLORD 1 AACUM 1 MEFFL 1 AMICR 1 ATENU 1 ASELA 1 APOCU 1 APALM 1 AMURI 1 AMILL 1 AINTE 1 CGRAC1 1 AHYAC 1 AGEMM 1 AFLOR 1 AECHI 1 ACYTH 1 AAWI 1 AYONG 1 CGRAC2 1 MCAPR 1 HCOER 1 MCAPI 1 AAUST 1 LSCAB 1 LSARM 1 LPERT 1 HIMPE 1 EVERR 1 CJARD 1 DPERT 1 DGIGA 1 DCYLI 1 DAXIF 1 CSALA 1 CNATA 1 TRENI 1

Species	Gene ID	Pfam term	Match	Source	Browser
AACUM	aacu_s0082.g104.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AAUST	ENSKKQP00000026673.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AAWI	aawi_s0007.g143.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ACYTH	acyt_s0264.g16.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AECHI	aech_s0004.g97.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AFLOR	aflo_s0096.g59.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AGEMM	agem_s0010.g53.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AHYAC	ahya_s1949.g1.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AINTE	aint_s0020.g103.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AMICR	amic_s0002.g140.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AMILL	XP_044175731.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AMURI	amur_s0149.g33.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000020705.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AMYRI	g5448.t1.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ANASU	anas_s0043.g32.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ANASU	anas_s0043.g32.t2	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ANASU	anas_s0043.g32.t3	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
APALM	XP_074616823.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
APOCU	evm.model.Ap4.5534	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ASELA	asel_s0081.g16.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ASPAT	ENSEWQP00005044025.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ASPAT	ENSEWQP00005044012.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ATENU	aten_s0004.g41.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
AYONG	ayon_s0004.g244.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
BWELL	g22990.t1.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
BWELL	BRAKERLUSP00000005028.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
CGRAC1	ENSFVQP00000027344.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000055754.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
CJARD	ENSAVKP00000004186.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
CNATA	FUN_010836-T1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
CSALA	ENSOFVP00000003887.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
DAXIF	ENSXFYP00000023604.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
DCRIB	g6858.t1.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
DCRIB	BRAKERRLHP00000007724.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
DCYLI	FUN_018492-T1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
DGIGA	XP_028409961.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
DPERT	KAJ7385024.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ECAVO	ENSLDHP00000012302.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ECAVO	ENSLDHP00000012285.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
EHORR	ENSJVNP00000006723.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
EHORR	ENSJVNP00000006733.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
EHORR	ENSJVNP00000006766.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
EHORR	ENSJVNP00000006758.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
EVERR	ENSNOVP00005009963.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
HCOER	ENSBQFP00000044894.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
HIMPE	evm.model.Chr14.68	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
LPERT	OS493_018717-T1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
LSARM	ENSAPQP00000005862.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
LSCAB	ANN08531-RA	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MCACT	g41621.t1.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MCACT	BRAKERNUSP00000051038.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MCAPI	g14040.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MCAPR	XP_068722475.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MEFFL	ENSTIFP00000024681.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MFOLI	XP_068697767.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MLORD	ENSSYXP00000017326.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MMEAN	ENSVBPP00000014731.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
MMURI	BRAKERXEIP00000050642.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
OARBU	ENSPTBP00000001978.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
OFAVE	XP_020631223.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
OFRAN	XP_081305507.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
OPATA	KAL9976015.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PACUT	Pocillopora_acuta_HIv2___RNAseq.g8055.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PAUST	paus_s0014.g68.t2	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PAUST	paus_s0014.g68.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PAUST	paus_s0014.g68.t3	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PCLAV	CAB4018915.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PCOMP	Porites_compressa_HIv1___RNAseq.g16512.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PCRUS	PcrG022227.mRNA1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PCYLI	ENSZOFP00000012946.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PDAMI	RMX51323.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PDIVA	ENSHHBP00000002561.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PEVER	CAH3028234.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PHARR	KAM7432186.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PLOBA	ENSNQRP00000046851.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PLOBA	ENSNQRP00000046860.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PLUTE	XP_073233272.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PMEAN	CAH3042042.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PMIZI	c0028.g024.t1.p1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PPAPI	Ppa0G374200	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PRUS	ENSGYQP00005018110.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PRUS	ENSGYQP00005018099.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PSINE2	evm.model.contig_77342.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PSINE2	evm.model.contig_77342.2	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PUMBR	c0298.g001.t1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
PVERR	XP_058944201.2	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
RFLOR	ENSORFP00005020768.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
RFLOR	ENSORFP00005020760.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
ROSCU	ENSJQFP00000033961.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
SINTE	ENSDDJP00000020519.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
SPIST	PFX19829.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
SRADI	ENSTHXP00000072388.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
SRADI	ENSTHXP00000072395.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
SSIDE	FUN_021312-T1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
TCOCC	TcoG031894.mRNA1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
TCOCC	TcoG036248.mRNA1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse
TRENI	ENSHNZP00000014635.1	PF21128	MCM4, winged helix domain	Interproscan	JBrowse