Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 130 gene–annotation pairs matching PF03948 across 148 genomes · 7494 ms.

Species with hits:MGRIS 8 HOLIG 4 EHORR 3 PSINE2 3 CCRUX 2 AINTE 2 CXAMA 2 MCACT 2 AMYRI 2 AMEDI 2 AAURI2 2 HOCTO 2 DCRIB 2 SPIST 2 AHEMP 2 AFLOR 2 AEQUI 2 HVIRI 2 TCOCC 2 TRUBR 2 BWELL 2 OFAVE 1 OARBU 1 OFRAN 1 NVECT 1 AACUM 1 MVIRU 1 MSENA 1 MMURI 1 MMEAN 1 PACUT 1 MFOLI 1 MCAPR 1 MLORD 1 PDAMI 1 PAUST 1 PUMBR 1 TSP 1 TRENI 1 SSIDE 1 SRADI 1 SINTE 1 SCALL 1 PXISH 1 PVERR 1 PSPEC 1 PCLAV 1 PSINE1 1 PRUS 1 PMIZI 1 PMEAN 1 PLUTE 1 PDIVA 1 PCYLI 1 PCRUS 1 PCOMP 1 MCAPI 1 HCOER 1 MAURE 1 ALORI 1 APULC 1 APOCU 1 APALM 1 ANASU 1 AMURI 1 AMILL 1 AMICR 1 ALIUI 1 ASP1 1 AIDSS 1 AHYAC 1 AGEMM 1 AECHI 1 ADIGI 1 ACYTH 1 ACERV 1 AAUST 1 ASELA 1 ASP2 1 LSCAB 1 DAXIF 1 LPERT 1 HIMPE 1 GFASC 1 FANCO 1 DPERT 1 DGIGA 1 DCYLI 1 CSP1 1 ASPAT 1 CSALA 1 CQUIN 1 CNATA 1 CGRAC2 1 CGIGA 1 AYONG 1 ATENU 1 ATENE 1 TSTEP 1

Species	Gene ID	Pfam term	Match	Source	Browser
AACUM	aacu_s0147.g33.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AAURI2	scaffold4696.g1.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AAURI2	scaffold683.g3.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AAUST	ENSKKQP00000011356.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ACERV	KAK2556456.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ACYTH	acyt_s0002.g64.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ADIGI	g26640.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AECHI	aech_s0129.g38.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AEQUI	EGACTEQ4350049462-PA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AEQUI	EGACTEQ4350051120-PA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AFLOR	aflo_s0370.g9.t2	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AFLOR	aflo_s0370.g9.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AGEMM	agem_s0322.g10.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AHEMP	Ahemp_006805-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AHEMP	Ahemp_006804-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AHYAC	ahya_s0036.g116.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AIDSS	alvinactis_v1_g28908	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AINTE	aint_s0188.g18.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AINTE	aint_s2934.g1.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ALIUI	gene27197.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ALORI	alor_g10279.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AMEDI	ENSQPTP00000051218.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AMEDI	ENSQPTP00000013481.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AMICR	amic_s0157.g24.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AMILL	XP_029207459.2	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AMURI	amur_s0161.g16.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AMYRI	BRAKERYMEP00000036022.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AMYRI	g10562.t1.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ANASU	anas_s0160.g2.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
APALM	XP_074625325.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
APOCU	evm.model.Ap6.240	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
APULC	FUN_025258-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ASELA	asel_s2320.g2.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ASP1	Acti_006417-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ASP2	Actinostola_05605	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ASPAT	ENSEWQP00005018116.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ATENE	XP_031563762.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
ATENU	aten_s0003.g123.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
AYONG	ayon_s0170.g18.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
BWELL	BRAKERLUSP00000020498.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
BWELL	g28563.t1.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CCRUX	g656.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CCRUX	g1225.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CGIGA	ENSKFPP00000013218.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000031779.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CNATA	FUN_024307-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CQUIN	evm.model.HiC_scaffold_1832.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CSALA	ENSOFVP00000031161.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CSP1	Csp0G414620	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CXAMA	Cxam_g2538.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
CXAMA	Cxam_g5684.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
DAXIF	ENSXFYP00000036650.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
DCRIB	g9944.t1.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
DCRIB	BRAKERRLHP00000016779.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
DCYLI	FUN_022227-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
DGIGA	XP_028393923.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
DPERT	KAJ7393400.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
EHORR	ENSJVNP00000042976.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
EHORR	ENSJVNP00000042951.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
EHORR	ENSJVNP00000042956.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
FANCO	eanc_s039.g0250.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
GFASC	gfas1.m1.170.m1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HCOER	ENSBQFP00000045363.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HIMPE	evm.model.Chr08.400	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HOCTO	g9722.t1.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HOCTO	BRAKERHOCP00005018229.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HOLIG	HOLI00001.G53351	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HOLIG	HOLI00002.G20881	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HOLIG	HOLI00150.G2279	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HOLIG	HOLI01423.G1500	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HVIRI	BRAKERKREP00000022811.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
HVIRI	g20523.t1.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
LPERT	OS493_006373-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
LSCAB	ANN12411-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MAURE	ENSIHXP00000031045.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MCACT	BRAKERNUSP00000054766.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MCACT	g30459.t1.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MCAPI	g17433.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MCAPR	XP_068753514.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MFOLI	XP_068696941.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN24976-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN40379-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN24258-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN30404-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN27200-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN07866-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN29119-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MGRIS	ANN23211-RA	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MLORD	ENSSYXP00000014526.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MMEAN	ENSVBPP00000019704.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MMURI	BRAKERXEIP00000048166.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MSENA	ENSVTRP00000027660.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
MVIRU	scaffold426.g6.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
NVECT	XP_001631549.2	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
OARBU	ENSPTBP00000031771.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
OFAVE	XP_020628139.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
OFRAN	XP_081316820.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PACUT	Pocillopora_acuta_HIv2___RNAseq.g30875.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PAUST	paus_s0606.g11.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PCLAV	CAB3987268.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PCOMP	Porites_compressa_HIv1___RNAseq.g705.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PCRUS	PcrG012590.mRNA1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PCYLI	ENSZOFP00000003179.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PDAMI	RMX38269.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PDIVA	ENSHHBP00000013645.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PLUTE	XP_073240027.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PMEAN	CAH3135412.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PMIZI	c1480.g004.t1.p1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PRUS	ENSGYQP00005000601.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PSINE1	g8883.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PSINE2	evm.model.scaffold_54429.5	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PSINE2	evm.model.contig_54427.2	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PSINE2	evm.model.scaffold_54429.2	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PSPEC	pspe_0.1.m1.9916.m1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PUMBR	c0596.g007.t1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PVERR	XP_058964779.2	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
PXISH	HK74SY85_g28307	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
SCALL	NY_Scal100_v1.33686.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
SINTE	ENSDDJP00000027991.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
SPIST	PFX11247.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
SPIST	PFX19948.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
SRADI	ENSTHXP00000010985.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
SSIDE	FUN_029885-T1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
TCOCC	TcoG003941.mRNA1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
TCOCC	TcoG022196.mRNA1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
TRENI	ENSHNZP00000022633.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
TRUBR	g10861.t1.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
TRUBR	BRAKERIOWP00000004319.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
TSP	Clavulariidae_g22107	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse
TSTEP	BRAKERFUXP00000016564.1	PF03948	Ribosomal protein L9, C-terminal domain	Interproscan	JBrowse