Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 113 gene–annotation pairs matching PF17875 across 148 genomes · 5646 ms.

Species with hits:PCLAV 3XSP 2AMEDI 2MCACT 2EHORR 2DLINE 2DGIGA 2DCRIB 2MSENI 2BWELL 2PAUST 2ASP1 2AMYRI 2PHARR 2HCOER 2TCOCC 2PMIZI 1MMEAN 1OARBU 1NVECT 1SCALL 1MSENA 1MMURI 1SMALA 1SPIST 1OFRAN 1SSIDE 1MLORD 1MFOLI 1MCAPR 1MCAPI 1TSTEP 1OFAVE 1ROSCU 1PMEAN 1PDIVA 1PPAPI 1PLUTE 1PPENN 1PGRIS 1PSINE1 1PEVER 1PDAMI 1OPATA 1PCYLI 1LSCAB 1PUMBR 1PCOMP 1PVERR 1PXISH 1PACUT 1PCRUS 1AACUM 1LSARM 1AHEMP 1AMURI 1AMILL 1AMICR 1ALORI 1ALIUI 1AINTE 1AIDSS 1AHYAC 1AGEMM 1APALM 1AFLOR 1AEQUI 1AECHI 1ACYTH 1ACERV 1AAWI 1AAUST 1AAURI1 1ANASU 1APOCU 1GFASC 1CJARD 1FANCO 1AALAT 1EDIAP 1ECAVO 1DCYLI 1CSP1 1CSALA 1CNATA 1CGRAC2 1APULC 1CGRAC1 1CGIGA 1AYONG 1AXANT 1ATENU 1ATENE 1ASPAT 1ASELA 1EVERR 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0009.g169.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AALATAala_g2065.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AAURI1scaffold301.g7.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AAUSTENSKKQP00000022689.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AAWIaawi_s0138.g15.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ACERVKAK2569319.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ACYTHacyt_s0207.g4.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AECHIaech_s0239.g4.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AEQUIEGACTEQ4350020122-PAPF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AFLORaflo_s2312.g2.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AGEMMagem_s0211.g53.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AHEMPAhemp_018325-T1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AHYACahya_s0066.g53.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AIDSSalvinactis_v1_g17737PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AINTEaint_s0178.g57.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ALIUIgene08179.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ALORIalor_g3339.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AMEDIENSQPTP00000008645.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AMEDIENSQPTP00000048480.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AMICRamic_s0119.g30.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AMILLXP_029209785.2PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AMURIamur_s0402.g4.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AMYRIBRAKERYMEP00000007500.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AMYRIg2745.t1.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ANASUanas_s0051.g51.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
APALMXP_074638677.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
APOCUevm.model.Ap12.1703PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
APULCFUN_033731-T1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ASELAasel_s0357.g4.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ASP1Acti_008785-T1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ASP1Acti_008777-T1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ASPATENSEWQP00005050217.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ATENEXP_031563127.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ATENUaten_s0208.g42.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AXANTENSOJPP00000008179.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
AYONGayon_s0039.g165.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
BWELLBRAKERLUSP00000027159.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
BWELLg3860.t1.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
CGIGAENSKFPP00000000868.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
CGRAC1ENSFVQP00000017176.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
CGRAC2BRAKERTYJP00000034666.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
CJARDENSAVKP00000033481.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
CNATAFUN_017513-T1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
CSALAENSOFVP00000035174.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
CSP1Csp0G155940PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
DCRIBBRAKERRLHP00000032858.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
DCRIBg33596.t1.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
DCYLIFUN_021346-T1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
DGIGAXP_028395753.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
DGIGAXP_028395752.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
DLINEENSDLIP00000008610.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
DLINEENSDLIP00000008606.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ECAVOENSLDHP00000021324.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
EDIAPKXJ12907.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
EHORRENSJVNP00000035850.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
EHORRENSJVNP00000035840.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
EVERRENSNOVP00005002807.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
FANCOeanc_s009.g0079.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
GFASCgfas1.m1.6667.m1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
HCOERENSBQFP00000026980.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
HCOERENSBQFP00000026983.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
LSARMENSAPQP00000002325.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
LSCABANN17789-RAPF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MCACTg30277.t1.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MCACTBRAKERNUSP00000036604.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MCAPIg20733.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MCAPRXP_068762442.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MFOLIXP_068672459.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MLORDENSSYXP00000037838.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MMEANENSVBPP00000006480.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MMURIBRAKERXEIP00000011646.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MSENAENSVTRP00000009004.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MSENIENSDTNP00000011011.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
MSENIENSDTNP00000011017.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
NVECTXP_001635284.3PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
OARBUENSPTBP00000041048.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
OFAVEXP_020607330.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
OFRANXP_081324642.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
OPATAKAL9956077.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g22260.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PAUSTpaus_s0048.g60.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PAUSTpaus_s0048.g60.t2PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PCLAVCAB4016924.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PCLAVCAB4043036.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PCLAVCAB4016925.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g18874.t1aPF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PCRUSPcrG006332.mRNA1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PCYLIENSZOFP00000028750.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PDAMIRMX49713.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PDIVAENSHHBP00000028811.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PEVERCAH3016260.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PGRISENSPYFP00000020759.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PHARRKAM7447965.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PHARRKAM7426259.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PLUTEXP_073246342.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PMEANCAH3040301.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PMIZIc0006.g046.t1.p1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PPAPIPpa0G269800PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PPENNENSDKPP00000015788.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PSINE1g7204.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PUMBRc0277.g008.t1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PVERRXP_058972294.2PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
PXISHHK74SY85_g23295PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
ROSCUENSJQFP00000003704.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
SCALLNY_Scal100_v1.19259.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
SMALAENSXQXP00000027176.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
SPISTPFX31647.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
SSIDEFUN_000232-T1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
TCOCCTcoG034270.mRNA1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
TCOCCTcoG037197.mRNA1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
TSTEPBRAKERFUXP00000017568.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
XSPXP_046860098.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse
XSPXP_046860096.1PF17875RPA43 OB domain in RNA Pol IInterproscanJBrowse

TOP