Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 116 gene–annotation pairs matching PF04949 across 148 genomes · 6817 ms.

Species with hits:HCOER 3PHARR 2SRADI 2AMILL 2SCALL 2DAXIF 2SMALA 2DLINE 2ECAVO 2OPATA 1PACUT 1PAUST 1PCOMP 1PCRUS 1OFAVE 1PCYLI 1OFRAN 1AACUM 1OARBU 1PDAMI 1MVIRU 1MSENA 1MPAPU 1MMEAN 1MLORD 1MFOLI 1MEFFL 1MDICH 1NVECT 1PLOBA 1PDIVA 1RFLOR 1TSTEP 1TRUBR 1TRENI 1TMAIP 1TDOHR 1TCOCC 1SSIDE 1SPIST 1SINTE 1ROSCU 1PVERR 1PEVER 1PUMBR 1PSPEC 1PSINE1 1PRUS 1PPENN 1PNOCT 1PMIZI 1PMEAN 1PLUTE 1MCAPR 1MCOMP 1MAURE 1MCAPI 1AINTE 1ASP1 1ASELA 1APULC 1APOCU 1APALM 1ANASU 1AMYRI 1AMURI 1ALORI 1AIDSS 1ATENU 1AHYAC 1AHEMP 1AGEMM 1AFLOR 1AECHI 1ADIGI 1ACYTH 1ACERV 1AAWI 1AAUST 1ASPAT 1AYONG 1MCACT 1DCYLI 1AALAT 1MALCI 1LSCAB 1LSARM 1HVULG 1HSYMB 1HIMPE 1GFASC 1FANCO 1EHORR 1CSP2 1BCFM 1CSP1 1CSALA 1CNATA 1CMOSA 1CJARD 1CHEMI 1CGRAC2 1CGIGA 1CCRUX 1BWELL 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0268.g26.t1PF04949Transcriptional activatorInterproscanJBrowse
AALATAala_g2145.t1PF04949Transcriptional activatorInterproscanJBrowse
AAUSTENSKKQP00000005283.1PF04949Transcriptional activatorInterproscanJBrowse
AAWIaawi_s0403.g4.t1PF04949Transcriptional activatorInterproscanJBrowse
ACERVKAK2566939.1PF04949Transcriptional activatorInterproscanJBrowse
ACYTHacyt_s0009.g24.t1PF04949Transcriptional activatorInterproscanJBrowse
ADIGIg2962.t1PF04949Transcriptional activatorInterproscanJBrowse
AECHIaech_s0037.g85.t1PF04949Transcriptional activatorInterproscanJBrowse
AFLORaflo_s0126.g12.t1PF04949Transcriptional activatorInterproscanJBrowse
AGEMMagem_s0219.g19.t1PF04949Transcriptional activatorInterproscanJBrowse
AHEMPAhemp_017191-T1PF04949Transcriptional activatorInterproscanJBrowse
AHYACahya_s0272.g14.t1PF04949Transcriptional activatorInterproscanJBrowse
AIDSSalvinactis_v1_g31866PF04949Transcriptional activatorInterproscanJBrowse
AINTEaint_s0528.g20.t1PF04949Transcriptional activatorInterproscanJBrowse
ALORIalor_g16113.t1PF04949Transcriptional activatorInterproscanJBrowse
AMILLXP_044177556.1PF04949Transcriptional activatorInterproscanJBrowse
AMILLXP_029192630.2PF04949Transcriptional activatorInterproscanJBrowse
AMURIamur_s0028.g23.t1PF04949Transcriptional activatorInterproscanJBrowse
AMYRIBRAKERYMEP00000006588.1PF04949Transcriptional activatorInterproscanJBrowse
ANASUanas_s0136.g23.t1PF04949Transcriptional activatorInterproscanJBrowse
APALMXP_074623713.1PF04949Transcriptional activatorInterproscanJBrowse
APOCUevm.model.Ap1.3300PF04949Transcriptional activatorInterproscanJBrowse
APULCFUN_043375-T1PF04949Transcriptional activatorInterproscanJBrowse
ASELAasel_s0073.g22.t1PF04949Transcriptional activatorInterproscanJBrowse
ASP1Acti_021302-T1PF04949Transcriptional activatorInterproscanJBrowse
ASPATENSEWQP00005006273.1PF04949Transcriptional activatorInterproscanJBrowse
ATENUaten_s0163.g29.t1PF04949Transcriptional activatorInterproscanJBrowse
AYONGayon_s0112.g36.t1PF04949Transcriptional activatorInterproscanJBrowse
BCFMM_g6281.t1PF04949Transcriptional activatorInterproscanJBrowse
BWELLBRAKERLUSP00000017133.1PF04949Transcriptional activatorInterproscanJBrowse
CCRUXg1519.t1PF04949Transcriptional activatorInterproscanJBrowse
CGIGAENSKFPP00000009403.1PF04949Transcriptional activatorInterproscanJBrowse
CGRAC2BRAKERTYJP00000006047.1PF04949Transcriptional activatorInterproscanJBrowse
CHEMIXP_066915073.1PF04949Transcriptional activatorInterproscanJBrowse
CJARDENSAVKP00000026547.1PF04949Transcriptional activatorInterproscanJBrowse
CMOSAENSSJYP00000002529.1PF04949Transcriptional activatorInterproscanJBrowse
CNATAFUN_002920-T1PF04949Transcriptional activatorInterproscanJBrowse
CSALAENSOFVP00000017323.1PF04949Transcriptional activatorInterproscanJBrowse
CSP1Csp0G221530PF04949Transcriptional activatorInterproscanJBrowse
CSP2P_ENSNWCP00000003946.1PF04949Transcriptional activatorInterproscanJBrowse
DAXIFENSXFYP00000021319.1PF04949Transcriptional activatorInterproscanJBrowse
DAXIFENSXFYP00000021311.1PF04949Transcriptional activatorInterproscanJBrowse
DCYLIFUN_031435-T1PF04949Transcriptional activatorInterproscanJBrowse
DLINEENSDLIP00000026361.1PF04949Transcriptional activatorInterproscanJBrowse
DLINEENSDLIP00000026368.1PF04949Transcriptional activatorInterproscanJBrowse
ECAVOENSLDHP00000015663.1PF04949Transcriptional activatorInterproscanJBrowse
ECAVOENSLDHP00000015670.1PF04949Transcriptional activatorInterproscanJBrowse
EHORRENSJVNP00000032163.1PF04949Transcriptional activatorInterproscanJBrowse
FANCOeanc_s057.g0152.t1PF04949Transcriptional activatorInterproscanJBrowse
GFASCgfas1.m1.6453.m1PF04949Transcriptional activatorInterproscanJBrowse
HCOERENSBQFP00000033857.1PF04949Transcriptional activatorInterproscanJBrowse
HCOERENSBQFP00000033872.1PF04949Transcriptional activatorInterproscanJBrowse
HCOERENSBQFP00000033864.1PF04949Transcriptional activatorInterproscanJBrowse
HIMPEevm.model.Chr15.702PF04949Transcriptional activatorInterproscanJBrowse
HSYMBHSymV2.0_g09.17182_t1PF04949Transcriptional activatorInterproscanJBrowse
HVULGXP_065660874.1PF04949Transcriptional activatorInterproscanJBrowse
LSARMENSAPQP00000001220.1PF04949Transcriptional activatorInterproscanJBrowse
LSCABANN02867-RAPF04949Transcriptional activatorInterproscanJBrowse
MALCIENSCIQP00000019078.1PF04949Transcriptional activatorInterproscanJBrowse
MAUREENSIHXP00000011316.1PF04949Transcriptional activatorInterproscanJBrowse
MCACTBRAKERNUSP00000031271.1PF04949Transcriptional activatorInterproscanJBrowse
MCAPIg35282.t1PF04949Transcriptional activatorInterproscanJBrowse
MCAPRXP_068728895.1PF04949Transcriptional activatorInterproscanJBrowse
MCOMPENSODKP00000037157.1PF04949Transcriptional activatorInterproscanJBrowse
MDICHENSYDOP00000040551.1PF04949Transcriptional activatorInterproscanJBrowse
MEFFLENSTIFP00000018069.1PF04949Transcriptional activatorInterproscanJBrowse
MFOLIXP_068695345.1PF04949Transcriptional activatorInterproscanJBrowse
MLORDENSSYXP00000009232.1PF04949Transcriptional activatorInterproscanJBrowse
MMEANENSVBPP00000022818.1PF04949Transcriptional activatorInterproscanJBrowse
MPAPUBRAKERKYLP00000023071.1PF04949Transcriptional activatorInterproscanJBrowse
MSENAENSVTRP00000022243.1PF04949Transcriptional activatorInterproscanJBrowse
MVIRUscaffold468.g13.t1PF04949Transcriptional activatorInterproscanJBrowse
NVECTXP_032228387.2PF04949Transcriptional activatorInterproscanJBrowse
OARBUENSPTBP00000023146.1PF04949Transcriptional activatorInterproscanJBrowse
OFAVEXP_020612357.1PF04949Transcriptional activatorInterproscanJBrowse
OFRANXP_081324994.1PF04949Transcriptional activatorInterproscanJBrowse
OPATAKAL9988776.1PF04949Transcriptional activatorInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g18755.t1PF04949Transcriptional activatorInterproscanJBrowse
PAUSTpaus_s0593.g12.t1PF04949Transcriptional activatorInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g37499.t1PF04949Transcriptional activatorInterproscanJBrowse
PCRUSPcrG026913.mRNA1PF04949Transcriptional activatorInterproscanJBrowse
PCYLIENSZOFP00000025780.1PF04949Transcriptional activatorInterproscanJBrowse
PDAMIRMX38642.1PF04949Transcriptional activatorInterproscanJBrowse
PDIVAENSHHBP00000022641.1PF04949Transcriptional activatorInterproscanJBrowse
PEVERCAH3164264.1PF04949Transcriptional activatorInterproscanJBrowse
PHARRKAM7430021.1PF04949Transcriptional activatorInterproscanJBrowse
PHARRKAM7437864.1PF04949Transcriptional activatorInterproscanJBrowse
PLOBAENSNQRP00000014600.1PF04949Transcriptional activatorInterproscanJBrowse
PLUTEXP_073242607.1PF04949Transcriptional activatorInterproscanJBrowse
PMEANCAH3033798.1PF04949Transcriptional activatorInterproscanJBrowse
PMIZIc0343.g020.t1.p1PF04949Transcriptional activatorInterproscanJBrowse
PNOCTENSXLYP00000026761.1PF04949Transcriptional activatorInterproscanJBrowse
PPENNENSDKPP00000009333.1PF04949Transcriptional activatorInterproscanJBrowse
PRUSENSGYQP00005021921.1PF04949Transcriptional activatorInterproscanJBrowse
PSINE1g5999.t1PF04949Transcriptional activatorInterproscanJBrowse
PSPECpspe_0.1.m1.36461.m1PF04949Transcriptional activatorInterproscanJBrowse
PUMBRc0146.g010.t1PF04949Transcriptional activatorInterproscanJBrowse
PVERRXP_058951218.2PF04949Transcriptional activatorInterproscanJBrowse
RFLORENSORFP00005005015.1PF04949Transcriptional activatorInterproscanJBrowse
ROSCUENSJQFP00000006772.1PF04949Transcriptional activatorInterproscanJBrowse
SCALLNY_Scal100_v1.26490.1PF04949Transcriptional activatorInterproscanJBrowse
SCALLNY_Scal100_v1.52462.1PF04949Transcriptional activatorInterproscanJBrowse
SINTEENSDDJP00000028749.1PF04949Transcriptional activatorInterproscanJBrowse
SMALAENSXQXP00000026229.1PF04949Transcriptional activatorInterproscanJBrowse
SMALAENSXQXP00000026236.1PF04949Transcriptional activatorInterproscanJBrowse
SPISTPFX34745.1PF04949Transcriptional activatorInterproscanJBrowse
SRADIENSTHXP00000060413.1PF04949Transcriptional activatorInterproscanJBrowse
SRADIENSTHXP00000060409.1PF04949Transcriptional activatorInterproscanJBrowse
SSIDEFUN_024167-T1PF04949Transcriptional activatorInterproscanJBrowse
TCOCCTcoG024922.mRNA1PF04949Transcriptional activatorInterproscanJBrowse
TDOHRTur_r2.0_p0033.1.g51597.t1PF04949Transcriptional activatorInterproscanJBrowse
TMAIPg11746.t1PF04949Transcriptional activatorInterproscanJBrowse
TRENIENSHNZP00000003963.1PF04949Transcriptional activatorInterproscanJBrowse
TRUBRBRAKERIOWP00000012326.1PF04949Transcriptional activatorInterproscanJBrowse
TSTEPBRAKERFUXP00000020719.1PF04949Transcriptional activatorInterproscanJBrowse
XSPXP_046844620.1PF04949Transcriptional activatorInterproscanJBrowse

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