Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 141 gene–annotation pairs matching PF04300 across 148 genomes · 6959 ms.

Species with hits:SMALA 10 RESCU 10 CMOSA 8 NNOMU 7 AAURI1 5 CGIGA 4 PNOCT 4 DAXIF 3 MPAPU 3 OARBU 3 DCYLI 3 PLOBA 3 CXAMA 3 CSP2 3 ASP3 3 LSARM 2 PMEAN 2 PGRIS 2 PCYLI 2 PCRUS 2 PACUT 2 PSINE1 2 PVERR 2 MMURI 2 MMEAN 2 XSP 2 LPERT 2 DPERT 2 CSP1 2 CGRAC2 2 CGRAC1 1 PLUTE 1 CSALA 1 PPAPI 1 PRUS 1 CNATA 1 RFLOR 1 DGIGA 1 SINTE 1 ASP1 1 SPIST 1 SRADI 1 SSIDE 1 TCOCC 1 TRENI 1 TSP 1 DCRIB 1 PDIVA 1 PEVER 1 EVERR 1 MAURE 1 MLORD 1 HVULG 1 HOLIG 1 HIMPE 1 MSENA 1 APOCU 1 HCOER 1 OFAVE 1 LSCAB 1 OFRAN 1 OPATA 1 EHORR 1 PAUST 1 PCLAV 1 PCOMP 1 ECAVO 1 PDAMI 1 MVIRU 1

Species	Gene ID	Pfam term	Match	Source	Browser
AAURI1	scaffold3.g156.t1	PF04300	F-box associated region	Interproscan	JBrowse
AAURI1	scaffold3.g156.t1	PF04300	F-box associated region	Interproscan	JBrowse
AAURI1	scaffold3.g156.t2	PF04300	F-box associated region	Interproscan	JBrowse
AAURI1	scaffold3.g156.t2	PF04300	F-box associated region	Interproscan	JBrowse
AAURI1	scaffold3.g156.t2	PF04300	F-box associated region	Interproscan	JBrowse
APOCU	evm.model.Ap6.2738	PF04300	F-box associated region	Interproscan	JBrowse
ASP1	Acti_049237-T1	PF04300	F-box associated region	Interproscan	JBrowse
ASP3	4_ENSDKXP00000001282.1	PF04300	F-box associated region	Interproscan	JBrowse
ASP3	4_ENSDKXP00000001282.1	PF04300	F-box associated region	Interproscan	JBrowse
ASP3	4_ENSDKXP00000001282.1	PF04300	F-box associated region	Interproscan	JBrowse
CGIGA	ENSKFPP00000010165.1	PF04300	F-box associated region	Interproscan	JBrowse
CGIGA	ENSKFPP00000010165.1	PF04300	F-box associated region	Interproscan	JBrowse
CGIGA	ENSKFPP00000008879.1	PF04300	F-box associated region	Interproscan	JBrowse
CGIGA	ENSKFPP00000010145.1	PF04300	F-box associated region	Interproscan	JBrowse
CGRAC1	ENSFVQP00000029070.1	PF04300	F-box associated region	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000010019.1	PF04300	F-box associated region	Interproscan	JBrowse
CGRAC2	BRAKERTYJP00000009962.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000019222.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000020859.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000020859.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000020859.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000022949.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000022949.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000022949.1	PF04300	F-box associated region	Interproscan	JBrowse
CMOSA	ENSSJYP00000019215.1	PF04300	F-box associated region	Interproscan	JBrowse
CNATA	FUN_011314-T1	PF04300	F-box associated region	Interproscan	JBrowse
CSALA	ENSOFVP00000028588.1	PF04300	F-box associated region	Interproscan	JBrowse
CSP1	Csp0G448160	PF04300	F-box associated region	Interproscan	JBrowse
CSP1	Csp0G448150	PF04300	F-box associated region	Interproscan	JBrowse
CSP2	P_ENSNWCP00000018599.1	PF04300	F-box associated region	Interproscan	JBrowse
CSP2	P_ENSNWCP00000018599.1	PF04300	F-box associated region	Interproscan	JBrowse
CSP2	P_ENSNWCP00000018599.1	PF04300	F-box associated region	Interproscan	JBrowse
CXAMA	Cxam_g25465.t1	PF04300	F-box associated region	Interproscan	JBrowse
CXAMA	Cxam_g22330.t1	PF04300	F-box associated region	Interproscan	JBrowse
CXAMA	Cxam_g22330.t1	PF04300	F-box associated region	Interproscan	JBrowse
DAXIF	ENSXFYP00000037389.1	PF04300	F-box associated region	Interproscan	JBrowse
DAXIF	ENSXFYP00000037399.1	PF04300	F-box associated region	Interproscan	JBrowse
DAXIF	ENSXFYP00000037360.1	PF04300	F-box associated region	Interproscan	JBrowse
DCRIB	BRAKERRLHP00000015764.1	PF04300	F-box associated region	Interproscan	JBrowse
DCYLI	FUN_016580-T1	PF04300	F-box associated region	Interproscan	JBrowse
DCYLI	FUN_016578-T1	PF04300	F-box associated region	Interproscan	JBrowse
DCYLI	FUN_016576-T1	PF04300	F-box associated region	Interproscan	JBrowse
DGIGA	XP_028398160.1	PF04300	F-box associated region	Interproscan	JBrowse
DPERT	KAJ7363537.1	PF04300	F-box associated region	Interproscan	JBrowse
DPERT	KAJ7363608.1	PF04300	F-box associated region	Interproscan	JBrowse
ECAVO	ENSLDHP00000009090.1	PF04300	F-box associated region	Interproscan	JBrowse
EHORR	ENSJVNP00000042789.1	PF04300	F-box associated region	Interproscan	JBrowse
EVERR	ENSNOVP00005013881.1	PF04300	F-box associated region	Interproscan	JBrowse
HCOER	ENSBQFP00000025658.1	PF04300	F-box associated region	Interproscan	JBrowse
HIMPE	evm.model.Chr17.367	PF04300	F-box associated region	Interproscan	JBrowse
HOLIG	HOLI00013.G45982	PF04300	F-box associated region	Interproscan	JBrowse
HVULG	XP_065664271.1	PF04300	F-box associated region	Interproscan	JBrowse
LPERT	OS493_009693-T1	PF04300	F-box associated region	Interproscan	JBrowse
LPERT	OS493_009770-T1	PF04300	F-box associated region	Interproscan	JBrowse
LSARM	ENSAPQP00000003863.1	PF04300	F-box associated region	Interproscan	JBrowse
LSARM	ENSAPQP00000003868.1	PF04300	F-box associated region	Interproscan	JBrowse
LSCAB	ANN10896-RA	PF04300	F-box associated region	Interproscan	JBrowse
MAURE	ENSIHXP00000030968.1	PF04300	F-box associated region	Interproscan	JBrowse
MLORD	ENSSYXP00000011697.1	PF04300	F-box associated region	Interproscan	JBrowse
MMEAN	ENSVBPP00000019224.1	PF04300	F-box associated region	Interproscan	JBrowse
MMEAN	ENSVBPP00000019219.1	PF04300	F-box associated region	Interproscan	JBrowse
MMURI	BRAKERXEIP00000042986.1	PF04300	F-box associated region	Interproscan	JBrowse
MMURI	BRAKERXEIP00000052586.1	PF04300	F-box associated region	Interproscan	JBrowse
MPAPU	BRAKERKYLP00000019765.1	PF04300	F-box associated region	Interproscan	JBrowse
MPAPU	BRAKERKYLP00000019765.1	PF04300	F-box associated region	Interproscan	JBrowse
MPAPU	BRAKERKYLP00000019765.1	PF04300	F-box associated region	Interproscan	JBrowse
MSENA	ENSVTRP00000028931.1	PF04300	F-box associated region	Interproscan	JBrowse
MVIRU	scaffold3.g27.t1	PF04300	F-box associated region	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000005245.1	PF04300	F-box associated region	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000005245.1	PF04300	F-box associated region	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000005245.1	PF04300	F-box associated region	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000016149.1	PF04300	F-box associated region	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000004967.1	PF04300	F-box associated region	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000004967.1	PF04300	F-box associated region	Interproscan	JBrowse
NNOMU	BRAKERMNPP00000004967.1	PF04300	F-box associated region	Interproscan	JBrowse
OARBU	ENSPTBP00000031914.1	PF04300	F-box associated region	Interproscan	JBrowse
OARBU	ENSPTBP00000030777.1	PF04300	F-box associated region	Interproscan	JBrowse
OARBU	ENSPTBP00000030654.1	PF04300	F-box associated region	Interproscan	JBrowse
OFAVE	XP_020620160.1	PF04300	F-box associated region	Interproscan	JBrowse
OFRAN	XP_081315012.1	PF04300	F-box associated region	Interproscan	JBrowse
OPATA	KAL9969100.1	PF04300	F-box associated region	Interproscan	JBrowse
PACUT	Pocillopora_acuta_HIv2___TS.g288.t1	PF04300	F-box associated region	Interproscan	JBrowse
PACUT	Pocillopora_acuta_HIv2___RNAseq.g11690.t1	PF04300	F-box associated region	Interproscan	JBrowse
PAUST	paus_s0132.g43.t1	PF04300	F-box associated region	Interproscan	JBrowse
PCLAV	CAB3980992.1	PF04300	F-box associated region	Interproscan	JBrowse
PCOMP	Porites_compressa_HIv1___RNAseq.g30099.t1	PF04300	F-box associated region	Interproscan	JBrowse
PCRUS	PcrG015201.mRNA1	PF04300	F-box associated region	Interproscan	JBrowse
PCRUS	PcrG015202.mRNA1	PF04300	F-box associated region	Interproscan	JBrowse
PCYLI	ENSZOFP00000001920.1	PF04300	F-box associated region	Interproscan	JBrowse
PCYLI	ENSZOFP00000001929.1	PF04300	F-box associated region	Interproscan	JBrowse
PDAMI	RMX48705.1	PF04300	F-box associated region	Interproscan	JBrowse
PDIVA	ENSHHBP00000011871.1	PF04300	F-box associated region	Interproscan	JBrowse
PEVER	CAH3025145.1	PF04300	F-box associated region	Interproscan	JBrowse
PGRIS	ENSPYFP00000010040.1	PF04300	F-box associated region	Interproscan	JBrowse
PGRIS	ENSPYFP00000010037.1	PF04300	F-box associated region	Interproscan	JBrowse
PLOBA	ENSNQRP00000002533.1	PF04300	F-box associated region	Interproscan	JBrowse
PLOBA	ENSNQRP00000002539.1	PF04300	F-box associated region	Interproscan	JBrowse
PLOBA	ENSNQRP00000002552.1	PF04300	F-box associated region	Interproscan	JBrowse
PLUTE	XP_073255746.1	PF04300	F-box associated region	Interproscan	JBrowse
PMEAN	CAH3121258.1	PF04300	F-box associated region	Interproscan	JBrowse
PMEAN	CAH3121256.1	PF04300	F-box associated region	Interproscan	JBrowse
PNOCT	ENSXLYP00000002047.1	PF04300	F-box associated region	Interproscan	JBrowse
PNOCT	ENSXLYP00000002058.1	PF04300	F-box associated region	Interproscan	JBrowse
PNOCT	ENSXLYP00000002058.1	PF04300	F-box associated region	Interproscan	JBrowse
PNOCT	ENSXLYP00000002058.1	PF04300	F-box associated region	Interproscan	JBrowse
PPAPI	Ppa0G334440	PF04300	F-box associated region	Interproscan	JBrowse
PRUS	ENSGYQP00005004731.1	PF04300	F-box associated region	Interproscan	JBrowse
PSINE1	g5721.t1	PF04300	F-box associated region	Interproscan	JBrowse
PSINE1	g5721.t1	PF04300	F-box associated region	Interproscan	JBrowse
PVERR	XP_058949289.2	PF04300	F-box associated region	Interproscan	JBrowse
PVERR	XP_066028037.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056699.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056699.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056699.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056698.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056698.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056698.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056700.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056700.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056700.1	PF04300	F-box associated region	Interproscan	JBrowse
RESCU	XP_065056705.1	PF04300	F-box associated region	Interproscan	JBrowse
RFLOR	ENSORFP00005018608.1	PF04300	F-box associated region	Interproscan	JBrowse
SINTE	ENSDDJP00000028010.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000002002.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000002002.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000002002.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000014388.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000014388.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000014388.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000014383.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000014383.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000014383.1	PF04300	F-box associated region	Interproscan	JBrowse
SMALA	ENSXQXP00000014371.1	PF04300	F-box associated region	Interproscan	JBrowse
SPIST	PFX34087.1	PF04300	F-box associated region	Interproscan	JBrowse
SRADI	ENSTHXP00000010797.1	PF04300	F-box associated region	Interproscan	JBrowse
SSIDE	FUN_016117-T1	PF04300	F-box associated region	Interproscan	JBrowse
TCOCC	TcoG020223.mRNA1	PF04300	F-box associated region	Interproscan	JBrowse
TRENI	ENSHNZP00000019400.1	PF04300	F-box associated region	Interproscan	JBrowse
TSP	Clavulariidae_g15629	PF04300	F-box associated region	Interproscan	JBrowse
XSP	XP_046839554.1	PF04300	F-box associated region	Interproscan	JBrowse
XSP	XP_046839553.1	PF04300	F-box associated region	Interproscan	JBrowse