Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 184 gene–annotation pairs matching PF04423 across 148 genomes · 8074 ms.

Species with hits:AAURI1 7CJARD 5ASELA 5PAUST 5CMOSA 3NVECT 3PLOBA 3AINTE 3AECHI 3MSENA 3MCOMP 3DAXIF 2PRUS 2MFOLI 2MMEAN 2MEFFL 2CSALA 2CSP2 2MDICH 2EHORR 2PDIVA 2MAURE 2EVERR 2HECHI 2ROSCU 2OFRAN 2OARBU 2MSENI 2PSINE2 2MLORD 2ATENU 2AMURI 2AAURI2 2AAUST 2AAWI 2ACERV 2TSTEP 2ADIGI 2AFLOR 2AGEMM 2AHYAC 2ALORI 2AMICR 2AMYRI 2ASPAT 2SSIDE 2APULC 2PLUTE 1PVERR 1SCALL 1PPAPI 1MPAPU 1SINTE 1SPIST 1PMEAN 1NSEPT 1TRUBR 1OFAVE 1TRENI 1OPATA 1PHARR 1PACUT 1TMAIP 1SRADI 1PCLAV 1PCOMP 1RFLOR 1TDOHR 1PCRUS 1PCYLI 1PDAMI 1PEVER 1PGRIS 1AACUM 1HOLIG 1MMURI 1ASP3 1CNATA 1CHEMI 1CGRAC2 1CGRAC1 1CCOCK 1BWELL 1AYONG 1ASP2 1CXAMA 1ASP1 1APOCU 1ANASU 1AMILL 1ALIUI 1AIDSS 1AHEMP 1ACYTH 1CSP1 1DCRIB 1MCAPR 1HVIRI 1MCAPI 1MCACT 1MALCI 1LSCAB 1LSARM 1LPERT 1HVULG 1HIMPE 1DCYLI 1HCOER 1GFASC 1FANCO 1EDIAP 1ECAVO 1DPERT 1DLINE 1DGIGA 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0386.g4.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI1scaffold109.g19.t2PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI1scaffold109.g19.t2PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI1scaffold109.g19.t4PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI1scaffold109.g19.t3PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI1scaffold109.g19.t3PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI1scaffold109.g19.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI1scaffold109.g19.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI2scaffold716.g3.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AAURI2scaffold716.g3.t3PF04423Rad50 zinc hook motifInterproscanJBrowse
AAUSTENSKKQP00000005581.1PF04423Rad50 zinc hook motifInterproscanJBrowse
AAUSTENSKKQP00000005604.1PF04423Rad50 zinc hook motifInterproscanJBrowse
AAWIaawi_s0010.g168.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AAWIaawi_s0010.g165.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ACERVKAK2547077.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ACERVKAK2555425.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ACYTHacyt_s0205.g11.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ADIGIg3422.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ADIGIg3427.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AECHIaech_s0135.g16.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AECHIaech_s0135.g18.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AECHIaech_s0135.g18.t3PF04423Rad50 zinc hook motifInterproscanJBrowse
AFLORaflo_s0182.g10.t2PF04423Rad50 zinc hook motifInterproscanJBrowse
AFLORaflo_s0182.g10.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AGEMMagem_s0005.g211.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AGEMMagem_s0005.g209.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AHEMPAhemp_007148-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
AHYACahya_s0138.g12.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AHYACahya_s0138.g14.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AIDSSalvinactis_v1_g12544PF04423Rad50 zinc hook motifInterproscanJBrowse
AINTEaint_s0321.g14.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AINTEaint_s0321.g12.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AINTEaint_s0321.g14.t2PF04423Rad50 zinc hook motifInterproscanJBrowse
ALIUIgene14654.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ALORIalor_g2598.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ALORIalor_g2602.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AMICRamic_s0021.g137.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AMICRamic_s0021.g139.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AMILLXP_029205270.2PF04423Rad50 zinc hook motifInterproscanJBrowse
AMURIamur_s0257.g18.t2PF04423Rad50 zinc hook motifInterproscanJBrowse
AMURIamur_s0257.g18.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AMYRIBRAKERYMEP00000016516.1PF04423Rad50 zinc hook motifInterproscanJBrowse
AMYRIBRAKERYMEP00000016517.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ANASUanas_s0022.g117.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
APOCUevm.model.Ap1.2360PF04423Rad50 zinc hook motifInterproscanJBrowse
APULCFUN_039976-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
APULCFUN_039973-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
ASELAasel_s0205.g34.t3PF04423Rad50 zinc hook motifInterproscanJBrowse
ASELAasel_s0205.g36.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ASELAasel_s0205.g34.t4PF04423Rad50 zinc hook motifInterproscanJBrowse
ASELAasel_s0205.g34.t2PF04423Rad50 zinc hook motifInterproscanJBrowse
ASELAasel_s0205.g34.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ASP1Acti_021964-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
ASP2Actinostola_18477PF04423Rad50 zinc hook motifInterproscanJBrowse
ASP34_ENSDKXP00000018239.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ASPATENSEWQP00005020105.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ASPATENSEWQP00005020079.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ATENUaten_s0104.g28.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
ATENUaten_s0104.g31.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
AYONGayon_s0026.g142.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
BWELLBRAKERLUSP00000017272.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CCOCKENSQNNP00000007122.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CGRAC1ENSFVQP00000020632.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CGRAC2BRAKERTYJP00000008548.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CHEMIXP_066919810.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CJARDENSAVKP00000025132.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CJARDENSAVKP00000025166.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CJARDENSAVKP00000025149.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CJARDENSAVKP00000025107.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CJARDENSAVKP00000027627.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CMOSAENSSJYP00000004521.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CMOSAENSSJYP00000004549.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CMOSAENSSJYP00000004530.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CNATAFUN_026287-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
CSALAENSOFVP00000018184.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CSALAENSOFVP00000018209.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CSP1Csp0G080950PF04423Rad50 zinc hook motifInterproscanJBrowse
CSP2P_ENSNWCP00000005960.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CSP2P_ENSNWCP00000005951.1PF04423Rad50 zinc hook motifInterproscanJBrowse
CXAMACxam_g17513.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
DAXIFENSXFYP00000022819.1PF04423Rad50 zinc hook motifInterproscanJBrowse
DAXIFENSXFYP00000022797.1PF04423Rad50 zinc hook motifInterproscanJBrowse
DCRIBBRAKERRLHP00000013933.1PF04423Rad50 zinc hook motifInterproscanJBrowse
DCYLIFUN_000937-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
DGIGAXP_028394772.1PF04423Rad50 zinc hook motifInterproscanJBrowse
DLINEENSDLIP00000025462.1PF04423Rad50 zinc hook motifInterproscanJBrowse
DPERTKAJ7370898.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ECAVOENSLDHP00000015340.1PF04423Rad50 zinc hook motifInterproscanJBrowse
EDIAPKXJ19676.1PF04423Rad50 zinc hook motifInterproscanJBrowse
EHORRENSJVNP00000034772.1PF04423Rad50 zinc hook motifInterproscanJBrowse
EHORRENSJVNP00000034803.1PF04423Rad50 zinc hook motifInterproscanJBrowse
EVERRENSNOVP00005014056.1PF04423Rad50 zinc hook motifInterproscanJBrowse
EVERRENSNOVP00005014073.1PF04423Rad50 zinc hook motifInterproscanJBrowse
FANCOeanc_s049.g0025.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
GFASCgfas1.m1.9291.m1PF04423Rad50 zinc hook motifInterproscanJBrowse
HCOERENSBQFP00000035788.1PF04423Rad50 zinc hook motifInterproscanJBrowse
HECHIENSDJXP00000051387.1PF04423Rad50 zinc hook motifInterproscanJBrowse
HECHIENSDJXP00000051372.1PF04423Rad50 zinc hook motifInterproscanJBrowse
HIMPEevm.model.Chr15.619PF04423Rad50 zinc hook motifInterproscanJBrowse
HOLIGHOLI00506.G32329PF04423Rad50 zinc hook motifInterproscanJBrowse
HVIRIBRAKERKREP00000009572.1PF04423Rad50 zinc hook motifInterproscanJBrowse
HVULGXP_065646762.1PF04423Rad50 zinc hook motifInterproscanJBrowse
LPERTOS493_028969-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
LSARMENSAPQP00000005448.1PF04423Rad50 zinc hook motifInterproscanJBrowse
LSCABANN01736-RAPF04423Rad50 zinc hook motifInterproscanJBrowse
MALCIENSCIQP00000015101.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MAUREENSIHXP00000014062.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MAUREENSIHXP00000014078.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MCACTBRAKERNUSP00000014219.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MCAPIg21669.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
MCAPRXP_068723645.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MCOMPENSODKP00000032148.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MCOMPENSODKP00000032193.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MCOMPENSODKP00000032169.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MDICHENSYDOP00000046232.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MDICHENSYDOP00000046222.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MEFFLENSTIFP00000044365.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MEFFLENSTIFP00000044404.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MFOLIXP_068694797.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MFOLIXP_068694799.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MLORDENSSYXP00000008057.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MLORDENSSYXP00000008030.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MMEANENSVBPP00000028558.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MMEANENSVBPP00000028529.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MMURIBRAKERXEIP00000025636.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MPAPUBRAKERKYLP00000023145.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MSENAENSVTRP00000022651.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MSENAENSVTRP00000022636.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MSENAENSVTRP00000022674.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MSENIENSDTNP00000025996.1PF04423Rad50 zinc hook motifInterproscanJBrowse
MSENIENSDTNP00000025981.1PF04423Rad50 zinc hook motifInterproscanJBrowse
NSEPTANN02848-RAPF04423Rad50 zinc hook motifInterproscanJBrowse
NVECTXP_048587512.1PF04423Rad50 zinc hook motifInterproscanJBrowse
NVECTXP_048587510.1PF04423Rad50 zinc hook motifInterproscanJBrowse
NVECTXP_048587511.1PF04423Rad50 zinc hook motifInterproscanJBrowse
OARBUENSPTBP00000023207.1PF04423Rad50 zinc hook motifInterproscanJBrowse
OARBUENSPTBP00000023183.1PF04423Rad50 zinc hook motifInterproscanJBrowse
OFAVEXP_020626835.1PF04423Rad50 zinc hook motifInterproscanJBrowse
OFRANXP_081331003.1PF04423Rad50 zinc hook motifInterproscanJBrowse
OFRANXP_081330995.1PF04423Rad50 zinc hook motifInterproscanJBrowse
OPATAKAL9988028.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g13037.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
PAUSTpaus_s0016.g117.t5PF04423Rad50 zinc hook motifInterproscanJBrowse
PAUSTpaus_s0016.g117.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
PAUSTpaus_s0016.g117.t3PF04423Rad50 zinc hook motifInterproscanJBrowse
PAUSTpaus_s0016.g117.t2PF04423Rad50 zinc hook motifInterproscanJBrowse
PAUSTpaus_s0016.g117.t4PF04423Rad50 zinc hook motifInterproscanJBrowse
PCLAVCAB4002713.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g11321.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
PCRUSPcrG018262.mRNA1PF04423Rad50 zinc hook motifInterproscanJBrowse
PCYLIENSZOFP00000025625.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PDAMIRMX58103.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PDIVAENSHHBP00000023947.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PDIVAENSHHBP00000023936.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PEVERCAH3151310.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PGRISENSPYFP00000009519.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PHARRKAM7441352.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PLOBAENSNQRP00000032402.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PLOBAENSNQRP00000032421.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PLOBAENSNQRP00000032390.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PLUTEXP_073242681.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PMEANCAH3038467.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PPAPIPpa0G326050PF04423Rad50 zinc hook motifInterproscanJBrowse
PRUSENSGYQP00005024275.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PRUSENSGYQP00005024297.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PSINE2evm.model.contig_89842.1PF04423Rad50 zinc hook motifInterproscanJBrowse
PSINE2evm.model.contig_61815.2PF04423Rad50 zinc hook motifInterproscanJBrowse
PVERRXP_066021687.1PF04423Rad50 zinc hook motifInterproscanJBrowse
RFLORENSORFP00005028897.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ROSCUENSJQFP00000008658.1PF04423Rad50 zinc hook motifInterproscanJBrowse
ROSCUENSJQFP00000008633.1PF04423Rad50 zinc hook motifInterproscanJBrowse
SCALLNY_Scal100_v1.22417.1PF04423Rad50 zinc hook motifInterproscanJBrowse
SINTEENSDDJP00000024744.1PF04423Rad50 zinc hook motifInterproscanJBrowse
SPISTPFX27266.1PF04423Rad50 zinc hook motifInterproscanJBrowse
SRADIENSTHXP00000055601.1PF04423Rad50 zinc hook motifInterproscanJBrowse
SSIDEFUN_034034-T2PF04423Rad50 zinc hook motifInterproscanJBrowse
SSIDEFUN_034034-T1PF04423Rad50 zinc hook motifInterproscanJBrowse
TDOHRTur_r2.0_p0149.1.g33401.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
TMAIPg11508.t1PF04423Rad50 zinc hook motifInterproscanJBrowse
TRENIENSHNZP00000002770.1PF04423Rad50 zinc hook motifInterproscanJBrowse
TRUBRBRAKERIOWP00000007492.1PF04423Rad50 zinc hook motifInterproscanJBrowse
TSTEPBRAKERFUXP00000013355.1PF04423Rad50 zinc hook motifInterproscanJBrowse
TSTEPBRAKERFUXP00000002958.1PF04423Rad50 zinc hook motifInterproscanJBrowse
XSPXP_046845509.1PF04423Rad50 zinc hook motifInterproscanJBrowse

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