Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 113 gene–annotation pairs matching PF18037 across 148 genomes · 6440 ms.

Species with hits:RFLOR 5AEQUI 4PLOBA 3ECAVO 3DAXIF 3PSINE1 2HCOER 2EVERR 2EDIAP 2PLUTE 2CSALA 2MMEAN 2PPENN 2SRADI 2AMEDI 2SSIDE 2CGIGA 2MSENI 2TDOHR 2AXANT 2OFAVE 2PCRUS 1PNOCT 1PDIVA 1PMIZI 1PMEAN 1PCYLI 1PEVER 1PHARR 1PGRIS 1AALAT 1PPAPI 1SPIST 1TSTEP 1TSP 1TRUBR 1TRENI 1TMAIP 1TCOCC 1SINTE 1PRUS 1SCALL 1ROSCU 1PXISH 1PVERR 1PUMBR 1PCLAV 1PCOMP 1NSEPT 1PAUST 1CGRAC1 1DCRIB 1CSP1 1CQUIN 1CNATA 1CJARD 1CGRAC2 1CCRUX 1DGIGA 1BWELL 1ATENE 1ASP1 1APOCU 1ALIUI 1AIDSS 1DCYLI 1DLINE 1OPATA 1LSCAB 1OFRAN 1OARBU 1NVECT 1MSENA 1MMURI 1MLORD 1LPERT 1DPERT 1HSYMB 1HIMPE 1HECHI 1GFASC 1FANCO 1EHORR 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AALATAala_g1622.t1PF18037Ubiquitin-like domainInterproscanJBrowse
AEQUIEGACTEQ4350006935-PCPF18037Ubiquitin-like domainInterproscanJBrowse
AEQUIEGACTEQ4350025295-PAPF18037Ubiquitin-like domainInterproscanJBrowse
AEQUIEGACTEQ4350006935-PAPF18037Ubiquitin-like domainInterproscanJBrowse
AEQUIEGACTEQ4350006935-PBPF18037Ubiquitin-like domainInterproscanJBrowse
AIDSSalvinactis_v1_g617PF18037Ubiquitin-like domainInterproscanJBrowse
ALIUIgene11779.t1PF18037Ubiquitin-like domainInterproscanJBrowse
AMEDIENSQPTP00000000930.1PF18037Ubiquitin-like domainInterproscanJBrowse
AMEDIENSQPTP00000041190.1PF18037Ubiquitin-like domainInterproscanJBrowse
APOCUevm.model.Ap11.1099PF18037Ubiquitin-like domainInterproscanJBrowse
ASP1Acti_013132-T1PF18037Ubiquitin-like domainInterproscanJBrowse
ATENEXP_031556693.1PF18037Ubiquitin-like domainInterproscanJBrowse
AXANTENSOJPP00000033776.1PF18037Ubiquitin-like domainInterproscanJBrowse
AXANTENSOJPP00000033764.1PF18037Ubiquitin-like domainInterproscanJBrowse
BWELLBRAKERLUSP00000009284.1PF18037Ubiquitin-like domainInterproscanJBrowse
CCRUXg817.t1PF18037Ubiquitin-like domainInterproscanJBrowse
CGIGAENSKFPP00000020147.1PF18037Ubiquitin-like domainInterproscanJBrowse
CGIGAENSKFPP00000020136.1PF18037Ubiquitin-like domainInterproscanJBrowse
CGRAC1ENSFVQP00000004572.1PF18037Ubiquitin-like domainInterproscanJBrowse
CGRAC2BRAKERTYJP00000040214.1PF18037Ubiquitin-like domainInterproscanJBrowse
CJARDENSAVKP00000016367.1PF18037Ubiquitin-like domainInterproscanJBrowse
CNATAFUN_010511-T1PF18037Ubiquitin-like domainInterproscanJBrowse
CQUINevm.model.HiC_scaffold_14.362PF18037Ubiquitin-like domainInterproscanJBrowse
CSALAENSOFVP00000015452.1PF18037Ubiquitin-like domainInterproscanJBrowse
CSALAENSOFVP00000015463.1PF18037Ubiquitin-like domainInterproscanJBrowse
CSP1Csp0G001090PF18037Ubiquitin-like domainInterproscanJBrowse
DAXIFENSXFYP00000012068.1PF18037Ubiquitin-like domainInterproscanJBrowse
DAXIFENSXFYP00000012056.1PF18037Ubiquitin-like domainInterproscanJBrowse
DAXIFENSXFYP00000012075.1PF18037Ubiquitin-like domainInterproscanJBrowse
DCRIBBRAKERRLHP00000046792.1PF18037Ubiquitin-like domainInterproscanJBrowse
DCYLIFUN_014156-T1PF18037Ubiquitin-like domainInterproscanJBrowse
DGIGAXP_028403320.1PF18037Ubiquitin-like domainInterproscanJBrowse
DLINEENSDLIP00000002015.1PF18037Ubiquitin-like domainInterproscanJBrowse
DPERTKAJ7351907.1PF18037Ubiquitin-like domainInterproscanJBrowse
ECAVOENSLDHP00000042836.1PF18037Ubiquitin-like domainInterproscanJBrowse
ECAVOENSLDHP00000042840.1PF18037Ubiquitin-like domainInterproscanJBrowse
ECAVOENSLDHP00000042848.1PF18037Ubiquitin-like domainInterproscanJBrowse
EDIAPKXJ08773.1PF18037Ubiquitin-like domainInterproscanJBrowse
EDIAPKXJ08723.1PF18037Ubiquitin-like domainInterproscanJBrowse
EHORRENSJVNP00000016814.1PF18037Ubiquitin-like domainInterproscanJBrowse
EVERRENSNOVP00005037967.1PF18037Ubiquitin-like domainInterproscanJBrowse
EVERRENSNOVP00005037961.1PF18037Ubiquitin-like domainInterproscanJBrowse
FANCOeanc_s019.g0362.t1PF18037Ubiquitin-like domainInterproscanJBrowse
GFASCgfas1.m1.13990.m1PF18037Ubiquitin-like domainInterproscanJBrowse
HCOERENSBQFP00000022519.1PF18037Ubiquitin-like domainInterproscanJBrowse
HCOERENSBQFP00000022537.1PF18037Ubiquitin-like domainInterproscanJBrowse
HECHIENSDJXP00000047753.1PF18037Ubiquitin-like domainInterproscanJBrowse
HIMPEevm.model.Chr06.1320PF18037Ubiquitin-like domainInterproscanJBrowse
HSYMBHSymV2.0_g04.06640_t1PF18037Ubiquitin-like domainInterproscanJBrowse
LPERTOS493_034511-T1PF18037Ubiquitin-like domainInterproscanJBrowse
LSCABANN32849-RAPF18037Ubiquitin-like domainInterproscanJBrowse
MLORDENSSYXP00000021366.1PF18037Ubiquitin-like domainInterproscanJBrowse
MMEANENSVBPP00000036687.1PF18037Ubiquitin-like domainInterproscanJBrowse
MMEANENSVBPP00000036685.1PF18037Ubiquitin-like domainInterproscanJBrowse
MMURIBRAKERXEIP00000047313.1PF18037Ubiquitin-like domainInterproscanJBrowse
MSENAENSVTRP00000011635.1PF18037Ubiquitin-like domainInterproscanJBrowse
MSENIENSDTNP00000017142.1PF18037Ubiquitin-like domainInterproscanJBrowse
MSENIENSDTNP00000017131.1PF18037Ubiquitin-like domainInterproscanJBrowse
NSEPTANN18621-RAPF18037Ubiquitin-like domainInterproscanJBrowse
NVECTXP_001641133.3PF18037Ubiquitin-like domainInterproscanJBrowse
OARBUENSPTBP00000014526.1PF18037Ubiquitin-like domainInterproscanJBrowse
OFAVEXP_020607232.1PF18037Ubiquitin-like domainInterproscanJBrowse
OFAVEXP_020607233.1PF18037Ubiquitin-like domainInterproscanJBrowse
OFRANXP_081309351.1PF18037Ubiquitin-like domainInterproscanJBrowse
OPATAKAL9958299.1PF18037Ubiquitin-like domainInterproscanJBrowse
PAUSTpaus_s0098.g27.t1PF18037Ubiquitin-like domainInterproscanJBrowse
PCLAVCAB3992183.1PF18037Ubiquitin-like domainInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g20681.t1PF18037Ubiquitin-like domainInterproscanJBrowse
PCRUSPcrG027481.mRNA1PF18037Ubiquitin-like domainInterproscanJBrowse
PCYLIENSZOFP00000012008.1PF18037Ubiquitin-like domainInterproscanJBrowse
PDIVAENSHHBP00000009584.1PF18037Ubiquitin-like domainInterproscanJBrowse
PEVERCAH3027505.1PF18037Ubiquitin-like domainInterproscanJBrowse
PGRISENSPYFP00000030099.1PF18037Ubiquitin-like domainInterproscanJBrowse
PHARRKAM7448270.1PF18037Ubiquitin-like domainInterproscanJBrowse
PLOBAENSNQRP00000023289.1PF18037Ubiquitin-like domainInterproscanJBrowse
PLOBAENSNQRP00000023310.1PF18037Ubiquitin-like domainInterproscanJBrowse
PLOBAENSNQRP00000023306.1PF18037Ubiquitin-like domainInterproscanJBrowse
PLUTEXP_073230882.1PF18037Ubiquitin-like domainInterproscanJBrowse
PLUTEXP_073230881.1PF18037Ubiquitin-like domainInterproscanJBrowse
PMEANCAH3132002.1PF18037Ubiquitin-like domainInterproscanJBrowse
PMIZIc0574.g014.t1.p1PF18037Ubiquitin-like domainInterproscanJBrowse
PNOCTENSXLYP00000008918.1PF18037Ubiquitin-like domainInterproscanJBrowse
PPAPIPpa0G305800PF18037Ubiquitin-like domainInterproscanJBrowse
PPENNENSDKPP00000041764.1PF18037Ubiquitin-like domainInterproscanJBrowse
PPENNENSDKPP00000041757.1PF18037Ubiquitin-like domainInterproscanJBrowse
PRUSENSGYQP00005014445.1PF18037Ubiquitin-like domainInterproscanJBrowse
PSINE1g448.t1.1.67252c34PF18037Ubiquitin-like domainInterproscanJBrowse
PSINE1g448.t1PF18037Ubiquitin-like domainInterproscanJBrowse
PUMBRc0524.g015.t1PF18037Ubiquitin-like domainInterproscanJBrowse
PVERRXP_058968490.2PF18037Ubiquitin-like domainInterproscanJBrowse
PXISHHK74SY85_g1435PF18037Ubiquitin-like domainInterproscanJBrowse
RFLORENSORFP00005042420.1PF18037Ubiquitin-like domainInterproscanJBrowse
RFLORENSORFP00005042407.1PF18037Ubiquitin-like domainInterproscanJBrowse
RFLORENSORFP00005031122.1PF18037Ubiquitin-like domainInterproscanJBrowse
RFLORENSORFP00005042431.1PF18037Ubiquitin-like domainInterproscanJBrowse
RFLORENSORFP00005031130.1PF18037Ubiquitin-like domainInterproscanJBrowse
ROSCUENSJQFP00000008840.1PF18037Ubiquitin-like domainInterproscanJBrowse
SCALLNY_Scal100_v1.39840.1PF18037Ubiquitin-like domainInterproscanJBrowse
SINTEENSDDJP00000041454.1PF18037Ubiquitin-like domainInterproscanJBrowse
SPISTPFX22345.1PF18037Ubiquitin-like domainInterproscanJBrowse
SRADIENSTHXP00000022700.1PF18037Ubiquitin-like domainInterproscanJBrowse
SRADIENSTHXP00000023023.1PF18037Ubiquitin-like domainInterproscanJBrowse
SSIDEFUN_053668-T1PF18037Ubiquitin-like domainInterproscanJBrowse
SSIDEFUN_053676-T1PF18037Ubiquitin-like domainInterproscanJBrowse
TCOCCTcoG022924.mRNA1PF18037Ubiquitin-like domainInterproscanJBrowse
TDOHRTur_r2.0_p0058.1.g73183.t1PF18037Ubiquitin-like domainInterproscanJBrowse
TDOHRTur_r2.0_p1048.1.g71328.t1PF18037Ubiquitin-like domainInterproscanJBrowse
TMAIPg10693.t1PF18037Ubiquitin-like domainInterproscanJBrowse
TRENIENSHNZP00000010871.1PF18037Ubiquitin-like domainInterproscanJBrowse
TRUBRBRAKERIOWP00000009275.1PF18037Ubiquitin-like domainInterproscanJBrowse
TSPClavulariidae_g21349PF18037Ubiquitin-like domainInterproscanJBrowse
TSTEPBRAKERFUXP00000040721.1PF18037Ubiquitin-like domainInterproscanJBrowse
XSPXP_046850921.1PF18037Ubiquitin-like domainInterproscanJBrowse

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