Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 148 gene–annotation pairs matching PF04904 across 148 genomes · 7349 ms.

Species with hits:CSP1 11PCLAV 5ECAVO 4EVERR 3MMURI 3DGIGA 3CSP2 3XSP 2AMEDI 2LSARM 2AAURI1 2DLINE 2CQUIN 2ATENE 2ASPAT 2TSTEP 2AAUST 2TSP 2TRENI 2PVERR 1NVECT 1OFRAN 1SCALL 1OFAVE 1SINTE 1SPIST 1OARBU 1SSIDE 1MSENI 1SRADI 1PACUT 1TCOCC 1MSENA 1MMEAN 1MLORD 1MFOLI 1OPATA 1PAUST 1PUMBR 1PLUTE 1PSPEC 1PXISH 1PSINE2 1PSINE1 1PRUS 1PPENN 1PPAPI 1PMIZI 1PMEAN 1PLOBA 1ROSCU 1PHARR 1PGRIS 1MCAPR 1RFLOR 1PEVER 1PDAMI 1PCYLI 1PCRUS 1PCOMP 1MEFFL 1AACUM 1MCAPI 1AIDSS 1APALM 1ANASU 1AMYRI 1AMURI 1AMILL 1AMICR 1ALORI 1ALIUI 1AINTE 1AHYAC 1APULC 1AHEMP 1AGEMM 1AFLOR 1AEQUI 1AECHI 1ADIGI 1ACYTH 1ACOER 1ACERV 1AAWI 1APOCU 1ASELA 1MCACT 1CSALA 1MAURE 1LSCAB 1HOCTO 1HIMPE 1EHORR 1EDIAP 1DCYLI 1DCRIB 1DAXIF 1CNATA 1ASP1 1CJARD 1CGRAC2 1CGRAC1 1CGIGA 1CCRUX 1BWELL 1AYONG 1AXANT 1ATENU 1ASP2 1FANCO 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0052.g76.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AAURI1scaffold143.g8.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AAURI1scaffold816.g2.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AAUSTENSKKQP00000044538.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AAUSTENSKKQP00000044550.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AAWIaawi_s0053.g6.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ACERVKAK2564863.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ACOERevm.model.ptg000028l.151PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ACYTHacyt_s0017.g61.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ADIGIg18644.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AECHIaech_s0040.g32.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AEQUIEGACTEQ4350046378-PAPF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AFLORaflo_s0321.g6.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AGEMMagem_s0006.g54.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AHEMPAhemp_002670-T1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AHYACahya_s0176.g31.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AIDSSalvinactis_v1_g984PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AINTEaint_s0005.g12.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ALIUIgene11502.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ALORIalor_g22137.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AMEDIENSQPTP00000040763.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AMEDIENSQPTP00000002426.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AMICRamic_s0316.g7.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AMILLXP_029187807.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AMURIamur_s0038.g32.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AMYRIBRAKERYMEP00000030313.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ANASUanas_s0263.g12.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
APALMXP_074624587.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
APOCUevm.model.Ap7.129PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
APULCFUN_026014-T1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ASELAasel_s0028.g10.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ASP1Acti_015128-T1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ASP2Actinostola_18668PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ASPATENSEWQP00005044113.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ASPATENSEWQP00005044126.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ATENEXP_031559117.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ATENEXP_031559118.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ATENUaten_s0060.g80.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AXANTENSOJPP00000035418.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
AYONGayon_s0006.g267.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
BWELLBRAKERLUSP00000024342.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CCRUXg870.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CGIGAENSKFPP00000019742.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CGRAC1ENSFVQP00000020066.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CGRAC2BRAKERTYJP00000003071.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CJARDENSAVKP00000036873.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CNATAFUN_024466-T1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CQUINevm.model.HiC_scaffold_12.330PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CQUINevm.model.HiC_scaffold_341.97PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSALAENSOFVP00000024391.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G127850PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G351950PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G398630PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G172550PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G431530PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G203410PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G301530PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G100530PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G318730PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G092580PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP1Csp0G381660PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP2P_ENSNWCP00000020922.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP2P_ENSNWCP00000018570.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
CSP2P_ENSNWCP00000018566.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DAXIFENSXFYP00000035295.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DCRIBBRAKERRLHP00000026980.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DCYLIFUN_039061-T1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DGIGAXP_028418316.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DGIGAXP_028398606.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DGIGAXP_028415815.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DLINEENSDLIP00000005102.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
DLINEENSDLIP00000005106.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ECAVOENSLDHP00000031226.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ECAVOENSLDHP00000003567.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ECAVOENSLDHP00000004551.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ECAVOENSLDHP00000036845.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
EDIAPKXJ16987.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
EHORRENSJVNP00000028030.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
EVERRENSNOVP00005007894.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
EVERRENSNOVP00005022220.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
EVERRENSNOVP00005006108.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
FANCOeanc_s024.g0285.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
HIMPEevm.model.Chr02.2280PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
HOCTOBRAKERHOCP00005009920.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
LSARMENSAPQP00000019902.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
LSARMENSAPQP00000016185.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
LSCABANN13553-RAPF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MAUREENSIHXP00000030166.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MCACTBRAKERNUSP00000007890.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MCAPIg34680.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MCAPRXP_068742027.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MEFFLENSTIFP00000012085.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MFOLIXP_068670638.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MLORDENSSYXP00000002437.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MMEANENSVBPP00000037979.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MMURIBRAKERXEIP00000008134.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MMURIBRAKERXEIP00000014913.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MMURIBRAKERXEIP00000036272.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MSENAENSVTRP00000032793.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
MSENIENSDTNP00000023959.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
NVECTXP_032238553.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
OARBUENSPTBP00000037387.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
OFAVEXP_020632412.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
OFRANXP_081320963.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
OPATAKAL9966102.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g28796.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PAUSTpaus_s0033.g33.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCLAVCAB4007296.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCLAVCAB3994261.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCLAVCAB4029421.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCLAVCAB3994262.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCLAVCAB3978156.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g6584.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCRUSPcrG018039.mRNA1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PCYLIENSZOFP00000018659.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PDAMIRMX56375.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PEVERCAH3161843.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PGRISENSPYFP00000033707.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PHARRKAM7448182.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PLOBAENSNQRP00000046820.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PLUTEXP_073237130.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PMEANCAH3131039.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PMIZIc0459.g007.t1.p1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PPAPIPpa0G291500PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PPENNENSDKPP00000022236.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PRUSENSGYQP00005024967.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PSINE1g1577.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PSINE2evm.model.contig_54466.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PSPECpspe_0.1.m1.7317.m1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PUMBRc0552.g003.t1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PVERRXP_058972894.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
PXISHHK74SY85_g29404PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
RFLORENSORFP00005018344.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
ROSCUENSJQFP00000029034.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
SCALLNY_Scal100_v1.1865.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
SINTEENSDDJP00000027224.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
SPISTPFX32418.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
SRADIENSTHXP00000067755.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
SSIDEFUN_038438-T1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
TCOCCTcoG020296.mRNA1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
TRENIENSHNZP00000010047.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
TRENIENSHNZP00000010056.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
TSPClavulariidae_g19627PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
TSPClavulariidae_g14992PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
TSTEPBRAKERFUXP00000047579.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
TSTEPBRAKERFUXP00000001604.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
XSPXP_046856310.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse
XSPXP_046856311.1PF04904NAB conserved region 1 (NCD1)InterproscanJBrowse

TOP