Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 154 gene–annotation pairs matching PF10404 across 148 genomes · 5562 ms.

Species with hits:HECHI 4AAURI1 3SRADI 3EVERR 3CCOCK 3HOLIG 3AAURI2 3RFLOR 3ASP3 3MDICH 3MAURE 2NVECT 2DAXIF 2CSP2 2ECAVO 2AAUST 2CMOSA 2MLORD 2CGRAC1 2CGIGA 2MCOMP 2TDOHR 2AXANT 2MSENA 2AMEDI 2AEQUI 2LSARM 2RESCU 2AMILL 2APALM 2NNOMU 1MPAPU 1PAUST 1MSENI 1OPATA 1PACUT 1MMURI 1MVIRU 1OFRAN 1OARBU 1PCOMP 1PCLAV 1PLUTE 1PCRUS 1PUMBR 1TSTEP 1TSP 1TRENI 1TMAIP 1SSIDE 1SPIST 1ROSCU 1PXISH 1PVERR 1PSINE2 1PCYLI 1PSINE1 1PRUS 1PPENN 1PNOCT 1PMIZI 1PMEAN 1PLOBA 1PHARR 1PGRIS 1PDIVA 1MMEAN 1HVULG 1MFOLI 1APOCU 1BCFM 1AYONG 1ATENU 1ATENE 1ASPAT 1ASP2 1ASP1 1APULC 1AMYRI 1CGRAC2 1AMICR 1ALORI 1ALIUI 1AIDSS 1AHEMP 1AFLOR 1ACOER 1ACERV 1AAWI 1BWELL 1CHEMI 1MEFFL 1HCOER 1MCAPR 1MCACT 1MALCI 1LSCAB 1LPERT 1HVIRI 1HSYMB 1HOCTO 1GFASC 1CJARD 1FANCO 1DPERT 1DLINE 1DGIGA 1DCYLI 1DCRIB 1CSP1 1CSALA 1CNATA 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI1scaffold230.g18.t3PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAURI1scaffold230.g18.t2PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAURI1scaffold230.g18.t5PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAURI2scaffold425.g6.t3PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAURI2scaffold425.g6.t2PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAURI2scaffold425.g6.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAUSTENSKKQP00000029602.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAUSTENSKKQP00000029594.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AAWIaawi_s0035.g68.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ACERVKAK2555670.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ACOERevm.model.ptg000004l.572PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AEQUIEGACTEQ4350016673-PBPF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AEQUIEGACTEQ4350016673-PAPF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AFLORaflo_s0017.g64.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AHEMPAhemp_010221-T1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AIDSSalvinactis_v1_g31675PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ALIUIgene24689.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ALORIalor_g14756.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AMEDIENSQPTP00000062541.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AMEDIENSQPTP00000022938.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AMICRamic_s0051.g52.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AMILLXP_029195301.2PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AMILLXP_029195302.2PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AMYRIBRAKERYMEP00000006852.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
APALMXP_074609302.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
APALMXP_074609301.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
APOCUevm.model.Ap10.738PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
APULCFUN_002668-T1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ASP1Acti_036908-T1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ASP2Actinostola_16889PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ASP34_ENSDKXP00000029184.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ASP34_ENSDKXP00000029196.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ASP34_ENSDKXP00000029203.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ASPATENSEWQP00005003050.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ATENEXP_031558895.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ATENUaten_s0076.g51.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AXANTENSOJPP00000020511.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AXANTENSOJPP00000020492.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
AYONGayon_s0016.g76.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
BCFMM_g13253.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
BWELLBRAKERLUSP00000011211.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CCOCKENSQNNP00000020593.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CCOCKENSQNNP00000020576.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CCOCKENSQNNP00000020563.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CGIGAENSKFPP00000011747.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CGIGAENSKFPP00000011735.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CGRAC1ENSFVQP00000030718.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CGRAC1ENSFVQP00000030702.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CGRAC2BRAKERTYJP00000004847.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CHEMIXP_066925704.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CJARDENSAVKP00000011702.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CMOSAENSSJYP00000007435.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CMOSAENSSJYP00000007461.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CNATAFUN_007142-T1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CSALAENSOFVP00000009533.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CSP1Csp0G447960PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CSP2P_ENSNWCP00000008819.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
CSP2P_ENSNWCP00000008794.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
DAXIFENSXFYP00000018448.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
DAXIFENSXFYP00000018441.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
DCRIBBRAKERRLHP00000042480.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
DCYLIFUN_035375-T1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
DGIGAXP_028398371.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
DLINEENSDLIP00000027599.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
DPERTKAJ7393148.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ECAVOENSLDHP00000008021.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ECAVOENSLDHP00000008000.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
EVERRENSNOVP00005012672.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
EVERRENSNOVP00005012651.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
EVERRENSNOVP00005012692.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
FANCOeanc_s129.g0014.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
GFASCgfas1.m1.14448.m1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HCOERENSBQFP00000035895.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HECHIENSDJXP00000051516.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HECHIENSDJXP00000017144.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HECHIENSDJXP00000017137.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HECHIENSDJXP00000017123.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HOCTOBRAKERHOCP00005019600.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HOLIGHOLI05296.G39561PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HOLIGHOLI00883.G41277PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HOLIGHOLI05457.G58442PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HSYMBHSymV2.0_g14.24212_t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HVIRIBRAKERKREP00000004576.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
HVULGXP_065674319.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
LPERTOS493_006114-T1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
LSARMENSAPQP00000003532.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
LSARMENSAPQP00000003554.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
LSCABANN30658-RAPF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MALCIENSCIQP00000009524.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MAUREENSIHXP00000009405.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MAUREENSIHXP00000009418.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MCACTBRAKERNUSP00000032421.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MCAPRXP_068760302.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MCOMPENSODKP00000015994.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MCOMPENSODKP00000016003.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MDICHENSYDOP00000015950.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MDICHENSYDOP00000015960.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MDICHENSYDOP00000015974.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MEFFLENSTIFP00000016182.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MFOLIXP_068713927.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MLORDENSSYXP00000021486.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MLORDENSSYXP00000021495.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MMEANENSVBPP00000037686.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MMURIBRAKERXEIP00000052470.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MPAPUBRAKERKYLP00000015970.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MSENAENSVTRP00000012633.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MSENAENSVTRP00000012646.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MSENIENSDTNP00000035240.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
MVIRUscaffold388.g4.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
NNOMUBRAKERMNPP00000015587.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
NVECTXP_048584374.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
NVECTXP_048584375.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
OARBUENSPTBP00000016146.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
OFRANXP_081339009.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
OPATAKAL9959833.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g6449.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PAUSTpaus_s0344.g26.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PCLAVCAB3998693.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g41599.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PCRUSPcrG003662.mRNA1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PCYLIENSZOFP00000010010.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PDIVAENSHHBP00000010725.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PGRISENSPYFP00000011941.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PHARRKAM7439222.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PLOBAENSNQRP00000011052.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PLUTEXP_073228361.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PMEANCAH3111921.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PMIZIc0128.g026.t1.p1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PNOCTENSXLYP00000015777.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PPENNENSDKPP00000024438.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PRUSENSGYQP00005011169.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PSINE1g4197.t2PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PSINE2evm.model.contig_23569.2PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PUMBRc0141.g015.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PVERRXP_058967981.2PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
PXISHHK74SY85_g7881PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
RESCUXP_065066948.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
RESCUXP_065066947.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
RFLORENSORFP00005042145.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
RFLORENSORFP00005042129.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
RFLORENSORFP00005010194.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
ROSCUENSJQFP00000014399.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
SPISTPFX29959.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
SRADIENSTHXP00000038408.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
SRADIENSTHXP00000038377.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
SRADIENSTHXP00000038366.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
SSIDEFUN_006544-T1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
TDOHRTur_r2.0_p1158.1.g35695.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
TDOHRTur_r2.0_p0919.1.g72452.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
TMAIPg2778.t1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
TRENIENSHNZP00000026163.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
TSPClavulariidae_g15703PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
TSTEPBRAKERFUXP00000041280.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse
XSPXP_046839996.1PF10404Rad4 beta-hairpin domain 2InterproscanJBrowse

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