Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 165 gene–annotation pairs matching PF05641 across 148 genomes · 7231 ms.

Species with hits:ASPAT 4AAUST 4MEFFL 4AMEDI 4EVERR 3PGRIS 3PLOBA 3AAURI1 3SRADI 3PSINE1 2OFAVE 2HVIRI 2AYONG 2BWELL 2LSARM 2CGIGA 2HCOER 2CSALA 2PHARR 2DGIGA 2PCLAV 2ASP3 2PDIVA 2AAWI 2TRUBR 2SCALL 2NNOMU 2AFLOR 2AMYRI 2MCACT 2AGEMM 2MDICH 2RFLOR 2MSENA 2ALIUI 2PCOMP 1PCRUS 1MSENI 1PAUST 1OPATA 1MVIRU 1OFRAN 1NVECT 1OARBU 1PACUT 1PNOCT 1PCYLI 1RESCU 1TSTEP 1TRENI 1TDOHR 1SSIDE 1SPIST 1SMALA 1SINTE 1ROSCU 1PXISH 1PEVER 1PVERR 1PUMBR 1PSPEC 1PRUS 1PPAPI 1MMURI 1PMIZI 1PMEAN 1PLUTE 1MPAPU 1AACUM 1MMEAN 1APOCU 1CGRAC2 1CGRAC1 1CCOCK 1BCFM 1AXANT 1ATENU 1ATENE 1ASP1 1APULC 1APALM 1CJARD 1ANASU 1AMILL 1AMICR 1ALORI 1AINTE 1AIDSS 1AHEMP 1AEQUI 1ADIGI 1CHEMI 1CMOSA 1MLORD 1HOLIG 1MFOLI 1MCOMP 1MCAPR 1MCAPI 1MAURE 1MALCI 1LPERT 1HVULG 1HSYMB 1HIMPE 1CNATA 1HECHI 1GFASC 1FANCO 1EDIAP 1DPERT 1DLINE 1DCYLI 1CXAMA 1CSP2 1CQUIN 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0106.g13.t1PF05641Agenet domainInterproscanJBrowse
AAURI1scaffold55.g15.t2PF05641Agenet domainInterproscanJBrowse
AAURI1scaffold55.g15.t3PF05641Agenet domainInterproscanJBrowse
AAURI1scaffold55.g15.t1PF05641Agenet domainInterproscanJBrowse
AAUSTENSKKQP00000035749.1PF05641Agenet domainInterproscanJBrowse
AAUSTENSKKQP00000035754.1PF05641Agenet domainInterproscanJBrowse
AAUSTENSKKQP00000035734.1PF05641Agenet domainInterproscanJBrowse
AAUSTENSKKQP00000035716.1PF05641Agenet domainInterproscanJBrowse
AAWIaawi_s0104.g75.t1PF05641Agenet domainInterproscanJBrowse
AAWIaawi_s0104.g75.t2PF05641Agenet domainInterproscanJBrowse
ADIGIg3.t1PF05641Agenet domainInterproscanJBrowse
AEQUIEGACTEQ4350021632-PAPF05641Agenet domainInterproscanJBrowse
AFLORaflo_s0292.g8.t2PF05641Agenet domainInterproscanJBrowse
AFLORaflo_s0292.g8.t1PF05641Agenet domainInterproscanJBrowse
AGEMMagem_s0089.g60.t1PF05641Agenet domainInterproscanJBrowse
AGEMMagem_s0089.g60.t2PF05641Agenet domainInterproscanJBrowse
AHEMPAhemp_018332-T1PF05641Agenet domainInterproscanJBrowse
AIDSSalvinactis_v1_g10288PF05641Agenet domainInterproscanJBrowse
AINTEaint_s0332.g29.t1PF05641Agenet domainInterproscanJBrowse
ALIUIgene15980.t2PF05641Agenet domainInterproscanJBrowse
ALIUIgene15980.t1PF05641Agenet domainInterproscanJBrowse
ALORIalor_g14194.t1PF05641Agenet domainInterproscanJBrowse
AMEDIENSQPTP00000066496.1PF05641Agenet domainInterproscanJBrowse
AMEDIENSQPTP00000026866.1PF05641Agenet domainInterproscanJBrowse
AMEDIENSQPTP00000066490.1PF05641Agenet domainInterproscanJBrowse
AMEDIENSQPTP00000026855.1PF05641Agenet domainInterproscanJBrowse
AMICRamic_s0176.g7.t1PF05641Agenet domainInterproscanJBrowse
AMILLXP_029197943.1PF05641Agenet domainInterproscanJBrowse
AMYRIg6941.t1.1PF05641Agenet domainInterproscanJBrowse
AMYRIBRAKERYMEP00000028224.1PF05641Agenet domainInterproscanJBrowse
ANASUanas_s0171.g5.t1PF05641Agenet domainInterproscanJBrowse
APALMXP_074632955.1PF05641Agenet domainInterproscanJBrowse
APOCUevm.model.Ap8.2524PF05641Agenet domainInterproscanJBrowse
APULCFUN_028511-T1PF05641Agenet domainInterproscanJBrowse
ASP1Acti_004416-T1PF05641Agenet domainInterproscanJBrowse
ASP34_ENSDKXP00000001063.1PF05641Agenet domainInterproscanJBrowse
ASP34_ENSDKXP00000001069.1PF05641Agenet domainInterproscanJBrowse
ASPATENSEWQP00005046868.1PF05641Agenet domainInterproscanJBrowse
ASPATENSEWQP00005046880.1PF05641Agenet domainInterproscanJBrowse
ASPATENSEWQP00005046864.1PF05641Agenet domainInterproscanJBrowse
ASPATENSEWQP00005046853.1PF05641Agenet domainInterproscanJBrowse
ATENEXP_031557475.1PF05641Agenet domainInterproscanJBrowse
ATENUaten_s0181.g41.t1PF05641Agenet domainInterproscanJBrowse
AXANTENSOJPP00000026780.1PF05641Agenet domainInterproscanJBrowse
AYONGayon_s0012.g86.t2PF05641Agenet domainInterproscanJBrowse
AYONGayon_s0012.g86.t1PF05641Agenet domainInterproscanJBrowse
BCFMM_g28887.t1PF05641Agenet domainInterproscanJBrowse
BWELLg25870.t1.1PF05641Agenet domainInterproscanJBrowse
BWELLBRAKERLUSP00000006718.1PF05641Agenet domainInterproscanJBrowse
CCOCKENSQNNP00000016053.1PF05641Agenet domainInterproscanJBrowse
CGIGAENSKFPP00000034056.1PF05641Agenet domainInterproscanJBrowse
CGIGAENSKFPP00000034043.1PF05641Agenet domainInterproscanJBrowse
CGRAC1ENSFVQP00000004116.1PF05641Agenet domainInterproscanJBrowse
CGRAC2BRAKERTYJP00000041766.1PF05641Agenet domainInterproscanJBrowse
CHEMIXP_066914491.1PF05641Agenet domainInterproscanJBrowse
CJARDENSAVKP00000011280.1PF05641Agenet domainInterproscanJBrowse
CMOSAENSSJYP00000018735.1PF05641Agenet domainInterproscanJBrowse
CNATAFUN_008139-T1PF05641Agenet domainInterproscanJBrowse
CQUINevm.model.HiC_scaffold_18.243PF05641Agenet domainInterproscanJBrowse
CSALAENSOFVP00000010246.1PF05641Agenet domainInterproscanJBrowse
CSALAENSOFVP00000010240.1PF05641Agenet domainInterproscanJBrowse
CSP2P_ENSNWCP00000021580.1PF05641Agenet domainInterproscanJBrowse
CXAMACxam_g6679.t1PF05641Agenet domainInterproscanJBrowse
DCYLIFUN_032437-T1PF05641Agenet domainInterproscanJBrowse
DGIGAXP_028405557.1PF05641Agenet domainInterproscanJBrowse
DGIGAXP_028405558.1PF05641Agenet domainInterproscanJBrowse
DLINEENSDLIP00000004713.1PF05641Agenet domainInterproscanJBrowse
DPERTKAJ7333184.1PF05641Agenet domainInterproscanJBrowse
EDIAPKXJ23162.1PF05641Agenet domainInterproscanJBrowse
EVERRENSNOVP00005027333.1PF05641Agenet domainInterproscanJBrowse
EVERRENSNOVP00005027356.1PF05641Agenet domainInterproscanJBrowse
EVERRENSNOVP00005027347.1PF05641Agenet domainInterproscanJBrowse
FANCOeanc_s062.g0139.t1PF05641Agenet domainInterproscanJBrowse
GFASCgfas1.m1.16526.m1PF05641Agenet domainInterproscanJBrowse
HCOERENSBQFP00000009939.1PF05641Agenet domainInterproscanJBrowse
HCOERENSBQFP00000009917.1PF05641Agenet domainInterproscanJBrowse
HECHIENSDJXP00000032518.1PF05641Agenet domainInterproscanJBrowse
HIMPEevm.model.Chr01.6617PF05641Agenet domainInterproscanJBrowse
HOLIGHOLI00291.G37842PF05641Agenet domainInterproscanJBrowse
HSYMBHSymV2.0_g03.05068_t1PF05641Agenet domainInterproscanJBrowse
HVIRIBRAKERKREP00000008976.1PF05641Agenet domainInterproscanJBrowse
HVIRIg21743.t1.1PF05641Agenet domainInterproscanJBrowse
HVULGXP_065644572.1PF05641Agenet domainInterproscanJBrowse
LPERTOS493_018360-T1PF05641Agenet domainInterproscanJBrowse
LSARMENSAPQP00000026366.1PF05641Agenet domainInterproscanJBrowse
LSARMENSAPQP00000026356.1PF05641Agenet domainInterproscanJBrowse
MALCIENSCIQP00000021480.1PF05641Agenet domainInterproscanJBrowse
MAUREENSIHXP00000005416.1PF05641Agenet domainInterproscanJBrowse
MCACTg32802.t1.1PF05641Agenet domainInterproscanJBrowse
MCACTBRAKERNUSP00000007825.1PF05641Agenet domainInterproscanJBrowse
MCAPIg8766.t1PF05641Agenet domainInterproscanJBrowse
MCAPRXP_068732423.1PF05641Agenet domainInterproscanJBrowse
MCOMPENSODKP00000038355.1PF05641Agenet domainInterproscanJBrowse
MDICHENSYDOP00000034662.1PF05641Agenet domainInterproscanJBrowse
MDICHENSYDOP00000034669.1PF05641Agenet domainInterproscanJBrowse
MEFFLENSTIFP00000041178.1PF05641Agenet domainInterproscanJBrowse
MEFFLENSTIFP00000041200.1PF05641Agenet domainInterproscanJBrowse
MEFFLENSTIFP00000041191.1PF05641Agenet domainInterproscanJBrowse
MEFFLENSTIFP00000041172.1PF05641Agenet domainInterproscanJBrowse
MFOLIXP_068685309.1PF05641Agenet domainInterproscanJBrowse
MLORDENSSYXP00000041586.1PF05641Agenet domainInterproscanJBrowse
MMEANENSVBPP00000000262.1PF05641Agenet domainInterproscanJBrowse
MMURIBRAKERXEIP00000039143.1PF05641Agenet domainInterproscanJBrowse
MPAPUBRAKERKYLP00000019360.1PF05641Agenet domainInterproscanJBrowse
MSENAENSVTRP00000037292.1PF05641Agenet domainInterproscanJBrowse
MSENAENSVTRP00000037286.1PF05641Agenet domainInterproscanJBrowse
MSENIENSDTNP00000022204.1PF05641Agenet domainInterproscanJBrowse
MVIRUscaffold9.g107.t1PF05641Agenet domainInterproscanJBrowse
NNOMUBRAKERMNPP00000004935.1PF05641Agenet domainInterproscanJBrowse
NNOMUg13038.t1.1PF05641Agenet domainInterproscanJBrowse
NVECTXP_048588795.1PF05641Agenet domainInterproscanJBrowse
OARBUENSPTBP00000005834.1PF05641Agenet domainInterproscanJBrowse
OFAVEXP_020620229.1PF05641Agenet domainInterproscanJBrowse
OFAVEXP_020620228.1PF05641Agenet domainInterproscanJBrowse
OFRANXP_081329377.1PF05641Agenet domainInterproscanJBrowse
OPATAKAL9965631.1PF05641Agenet domainInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g17666.t1PF05641Agenet domainInterproscanJBrowse
PAUSTpaus_s0609.g4.t1PF05641Agenet domainInterproscanJBrowse
PCLAVCAB3983714.1PF05641Agenet domainInterproscanJBrowse
PCLAVCAB3983715.1PF05641Agenet domainInterproscanJBrowse
PCOMPPorites_compressa_HIv1___TS.g29428.t2PF05641Agenet domainInterproscanJBrowse
PCRUSPcrG019370.mRNA1PF05641Agenet domainInterproscanJBrowse
PCYLIENSZOFP00000035564.1PF05641Agenet domainInterproscanJBrowse
PDIVAENSHHBP00000031091.1PF05641Agenet domainInterproscanJBrowse
PDIVAENSHHBP00000031086.1PF05641Agenet domainInterproscanJBrowse
PEVERCAH3020659.1PF05641Agenet domainInterproscanJBrowse
PGRISENSPYFP00000004491.1PF05641Agenet domainInterproscanJBrowse
PGRISENSPYFP00000004520.1PF05641Agenet domainInterproscanJBrowse
PGRISENSPYFP00000004508.1PF05641Agenet domainInterproscanJBrowse
PHARRKAM7440451.1PF05641Agenet domainInterproscanJBrowse
PHARRKAM7440452.1PF05641Agenet domainInterproscanJBrowse
PLOBAENSNQRP00000047140.1PF05641Agenet domainInterproscanJBrowse
PLOBAENSNQRP00000047134.1PF05641Agenet domainInterproscanJBrowse
PLOBAENSNQRP00000047124.1PF05641Agenet domainInterproscanJBrowse
PLUTEXP_073255201.1PF05641Agenet domainInterproscanJBrowse
PMEANCAH3145997.1PF05641Agenet domainInterproscanJBrowse
PMIZIc0076.g003.t1.p1PF05641Agenet domainInterproscanJBrowse
PNOCTENSXLYP00000002405.1PF05641Agenet domainInterproscanJBrowse
PPAPIPpa0G075340PF05641Agenet domainInterproscanJBrowse
PRUSENSGYQP00005041780.1PF05641Agenet domainInterproscanJBrowse
PSINE1g17692.t1PF05641Agenet domainInterproscanJBrowse
PSINE1g17692.t1.1.67253088PF05641Agenet domainInterproscanJBrowse
PSPECpspe_0.1.m1.51978.m1PF05641Agenet domainInterproscanJBrowse
PUMBRc1595.g003.t1PF05641Agenet domainInterproscanJBrowse
PVERRXP_058942361.2PF05641Agenet domainInterproscanJBrowse
PXISHHK74SY85_g8683PF05641Agenet domainInterproscanJBrowse
RESCUXP_065056091.1PF05641Agenet domainInterproscanJBrowse
RFLORENSORFP00005024841.1PF05641Agenet domainInterproscanJBrowse
RFLORENSORFP00005024818.1PF05641Agenet domainInterproscanJBrowse
ROSCUENSJQFP00000023143.1PF05641Agenet domainInterproscanJBrowse
SCALLNY_Scal100_v1.26056.1PF05641Agenet domainInterproscanJBrowse
SCALLNY_Scal100_v1.23072.1PF05641Agenet domainInterproscanJBrowse
SINTEENSDDJP00000003033.1PF05641Agenet domainInterproscanJBrowse
SMALAENSXQXP00000015137.1PF05641Agenet domainInterproscanJBrowse
SPISTPFX16191.1PF05641Agenet domainInterproscanJBrowse
SRADIENSTHXP00000031727.1PF05641Agenet domainInterproscanJBrowse
SRADIENSTHXP00000031734.1PF05641Agenet domainInterproscanJBrowse
SRADIENSTHXP00000031715.1PF05641Agenet domainInterproscanJBrowse
SSIDEFUN_001978-T1PF05641Agenet domainInterproscanJBrowse
TDOHRTur_r2.0_p0015.1.g16176.t1PF05641Agenet domainInterproscanJBrowse
TRENIENSHNZP00000005472.1PF05641Agenet domainInterproscanJBrowse
TRUBRBRAKERIOWP00000008062.1PF05641Agenet domainInterproscanJBrowse
TRUBRg9796.t1.1PF05641Agenet domainInterproscanJBrowse
TSTEPBRAKERFUXP00000045189.1PF05641Agenet domainInterproscanJBrowse
XSPXP_046852685.1PF05641Agenet domainInterproscanJBrowse

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