Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 160 gene–annotation pairs matching PF01250 across 148 genomes · 4835 ms.

Species with hits:MGRIS 4HOLIG 4MSENI 3CXAMA 3AEQUI 3EHORR 3RFLOR 3PLOBA 2PCOMP 2PGRIS 2CSP2 2PPENN 2ATENE 2ASPAT 2DLINE 2CQUIN 2PDIVA 2HVIRI 2HCOER 2AAURI1 2AMEDI 2MSENA 1MEFFL 1MFOLI 1PCLAV 1MHONG 1PAUST 1PACUT 1OPATA 1OFRAN 1MLORD 1MMEAN 1MMURI 1OFAVE 1OARBU 1NVECT 1NSEPT 1MPAPU 1MSQUA 1AACUM 1PDAMI 1ROSCU 1TSTEP 1TRUBR 1TRENI 1TMAIP 1TKITA 1TDOHR 1TCOCC 1SSIDE 1SRADI 1SPIST 1SMALA 1SINTE 1SCALL 1RESCU 1PEVER 1PXISH 1PVERR 1PUMBR 1PSPEC 1PSINE2 1PSINE1 1PRUS 1PPAPI 1PNOCT 1PMIZI 1PMEAN 1PLUTE 1MCOMP 1MDICH 1LPERT 1MCAPR 1AMILL 1AYONG 1AXANT 1ATENU 1ASP3 1ASP1 1APULC 1APOCU 1APALM 1ANASU 1AMYRI 1AMURI 1AMICR 1BWELL 1ALORI 1AINTE 1AHEMP 1AFLOR 1AECHI 1ADIGI 1ACYTH 1ACOER 1ACERV 1AAWI 1AAUST 1AAURI2 1BCFM 1CCRUX 1MCAPI 1EDIAP 1MCACT 1MAURE 1LSCAB 1LSARM 1HSYMB 1HOCTO 1HIMPE 1HECHI 1GFASC 1FANCO 1EVERR 1EELEG 1ECAVO 1CGIGA 1DPERT 1DGIGA 1DCYLI 1DCRIB 1DAXIF 1CSP1 1CSALA 1CNATA 1CMOSA 1CJARD 1CGRAC2 1CGRAC1 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0541.g9.t1PF01250Ribosomal protein S6InterproscanJBrowse
AAURI1scaffold15.g46.t1PF01250Ribosomal protein S6InterproscanJBrowse
AAURI1scaffold15.g45.t1PF01250Ribosomal protein S6InterproscanJBrowse
AAURI2scaffold683.g4.t1PF01250Ribosomal protein S6InterproscanJBrowse
AAUSTENSKKQP00000009428.1PF01250Ribosomal protein S6InterproscanJBrowse
AAWIaawi_s0098.g75.t1PF01250Ribosomal protein S6InterproscanJBrowse
ACERVKAK2570821.1PF01250Ribosomal protein S6InterproscanJBrowse
ACOERevm.model.ptg000009l.146PF01250Ribosomal protein S6InterproscanJBrowse
ACYTHacyt_s0030.g47.t1PF01250Ribosomal protein S6InterproscanJBrowse
ADIGIg25220.t1PF01250Ribosomal protein S6InterproscanJBrowse
AECHIaech_s0118.g38.t1PF01250Ribosomal protein S6InterproscanJBrowse
AEQUIEGACTEQ4350023138-PAPF01250Ribosomal protein S6InterproscanJBrowse
AEQUIEGACTEQ4350043805-PAPF01250Ribosomal protein S6InterproscanJBrowse
AEQUIEGACTEQ4350013592-PAPF01250Ribosomal protein S6InterproscanJBrowse
AFLORaflo_s0148.g10.t1PF01250Ribosomal protein S6InterproscanJBrowse
AHEMPAhemp_001828-T1PF01250Ribosomal protein S6InterproscanJBrowse
AINTEaint_s0009.g5.t1PF01250Ribosomal protein S6InterproscanJBrowse
ALORIalor_g6703.t1PF01250Ribosomal protein S6InterproscanJBrowse
AMEDIENSQPTP00000057320.1PF01250Ribosomal protein S6InterproscanJBrowse
AMEDIENSQPTP00000016586.1PF01250Ribosomal protein S6InterproscanJBrowse
AMICRamic_s0169.g54.t1PF01250Ribosomal protein S6InterproscanJBrowse
AMILLXP_029187041.2PF01250Ribosomal protein S6InterproscanJBrowse
AMURIamur_s0014.g41.t1PF01250Ribosomal protein S6InterproscanJBrowse
AMYRIBRAKERYMEP00000024738.1PF01250Ribosomal protein S6InterproscanJBrowse
ANASUanas_s0181.g30.t1PF01250Ribosomal protein S6InterproscanJBrowse
APALMXP_074627350.1PF01250Ribosomal protein S6InterproscanJBrowse
APOCUevm.model.Ap6.2919PF01250Ribosomal protein S6InterproscanJBrowse
APULCFUN_011960-T1PF01250Ribosomal protein S6InterproscanJBrowse
ASP1Acti_018188-T1PF01250Ribosomal protein S6InterproscanJBrowse
ASP34_ENSDKXP00000006587.1PF01250Ribosomal protein S6InterproscanJBrowse
ASPATENSEWQP00005018074.1PF01250Ribosomal protein S6InterproscanJBrowse
ASPATENSEWQP00005018067.1PF01250Ribosomal protein S6InterproscanJBrowse
ATENEXP_031555890.1PF01250Ribosomal protein S6InterproscanJBrowse
ATENEXP_031555882.1PF01250Ribosomal protein S6InterproscanJBrowse
ATENUaten_s0002.g187.t1PF01250Ribosomal protein S6InterproscanJBrowse
AXANTENSOJPP00000012514.1PF01250Ribosomal protein S6InterproscanJBrowse
AYONGayon_s0036.g82.t1PF01250Ribosomal protein S6InterproscanJBrowse
BCFMM_g39399.t1PF01250Ribosomal protein S6InterproscanJBrowse
BWELLBRAKERLUSP00000018953.1PF01250Ribosomal protein S6InterproscanJBrowse
CCRUXg655.t1PF01250Ribosomal protein S6InterproscanJBrowse
CGIGAENSKFPP00000026092.1PF01250Ribosomal protein S6InterproscanJBrowse
CGRAC1ENSFVQP00000009372.1PF01250Ribosomal protein S6InterproscanJBrowse
CGRAC2BRAKERTYJP00000020308.1PF01250Ribosomal protein S6InterproscanJBrowse
CJARDENSAVKP00000031874.1PF01250Ribosomal protein S6InterproscanJBrowse
CMOSAENSSJYP00000010970.1PF01250Ribosomal protein S6InterproscanJBrowse
CNATAFUN_011621-T1PF01250Ribosomal protein S6InterproscanJBrowse
CQUINevm.model.HiC_scaffold_255.12PF01250Ribosomal protein S6InterproscanJBrowse
CQUINevm.model.HiC_scaffold_254.43PF01250Ribosomal protein S6InterproscanJBrowse
CSALAENSOFVP00000027956.1PF01250Ribosomal protein S6InterproscanJBrowse
CSP1Csp0G090370PF01250Ribosomal protein S6InterproscanJBrowse
CSP2P_ENSNWCP00000010907.1PF01250Ribosomal protein S6InterproscanJBrowse
CSP2P_ENSNWCP00000010903.1PF01250Ribosomal protein S6InterproscanJBrowse
CXAMACxam_g2540.t1PF01250Ribosomal protein S6InterproscanJBrowse
CXAMACxam_g19303.t1PF01250Ribosomal protein S6InterproscanJBrowse
CXAMACxam_g5684.t1PF01250Ribosomal protein S6InterproscanJBrowse
DAXIFENSXFYP00000041083.1PF01250Ribosomal protein S6InterproscanJBrowse
DCRIBBRAKERRLHP00000014753.1PF01250Ribosomal protein S6InterproscanJBrowse
DCYLIFUN_037730-T1PF01250Ribosomal protein S6InterproscanJBrowse
DGIGAXP_028409535.1PF01250Ribosomal protein S6InterproscanJBrowse
DLINEENSDLIP00000011310.1PF01250Ribosomal protein S6InterproscanJBrowse
DLINEENSDLIP00000011302.1PF01250Ribosomal protein S6InterproscanJBrowse
DPERTKAJ7321764.1PF01250Ribosomal protein S6InterproscanJBrowse
ECAVOENSLDHP00000038854.1PF01250Ribosomal protein S6InterproscanJBrowse
EDIAPKXJ09762.1PF01250Ribosomal protein S6InterproscanJBrowse
EELEGjg43309.t1PF01250Ribosomal protein S6InterproscanJBrowse
EHORRENSJVNP00000038472.1PF01250Ribosomal protein S6InterproscanJBrowse
EHORRENSJVNP00000038461.1PF01250Ribosomal protein S6InterproscanJBrowse
EHORRENSJVNP00000038467.1PF01250Ribosomal protein S6InterproscanJBrowse
EVERRENSNOVP00005031781.1PF01250Ribosomal protein S6InterproscanJBrowse
FANCOeanc_s003.g0007.t1PF01250Ribosomal protein S6InterproscanJBrowse
GFASCgfas1.m1.16255.m1PF01250Ribosomal protein S6InterproscanJBrowse
HCOERENSBQFP00000048392.1PF01250Ribosomal protein S6InterproscanJBrowse
HCOERENSBQFP00000048404.1PF01250Ribosomal protein S6InterproscanJBrowse
HECHIENSDJXP00000044733.1PF01250Ribosomal protein S6InterproscanJBrowse
HIMPEevm.model.Contig141.4PF01250Ribosomal protein S6InterproscanJBrowse
HOCTOBRAKERHOCP00005016060.1PF01250Ribosomal protein S6InterproscanJBrowse
HOLIGHOLI00001.G53348PF01250Ribosomal protein S6InterproscanJBrowse
HOLIGHOLI00002.G20879PF01250Ribosomal protein S6InterproscanJBrowse
HOLIGHOLI00150.G2276PF01250Ribosomal protein S6InterproscanJBrowse
HOLIGHOLI02409.G4203PF01250Ribosomal protein S6InterproscanJBrowse
HSYMBHSymV2.0_g05.09196_t1PF01250Ribosomal protein S6InterproscanJBrowse
HVIRIBRAKERKREP00000023086.1PF01250Ribosomal protein S6InterproscanJBrowse
HVIRIBRAKERKREP00000008934.1PF01250Ribosomal protein S6InterproscanJBrowse
LPERTOS493_033872-T1PF01250Ribosomal protein S6InterproscanJBrowse
LSARMENSAPQP00000033135.1PF01250Ribosomal protein S6InterproscanJBrowse
LSCABANN10583-RAPF01250Ribosomal protein S6InterproscanJBrowse
MAUREENSIHXP00000033407.1PF01250Ribosomal protein S6InterproscanJBrowse
MCACTBRAKERNUSP00000015996.1PF01250Ribosomal protein S6InterproscanJBrowse
MCAPIg12370.t1PF01250Ribosomal protein S6InterproscanJBrowse
MCAPRXP_068755340.1PF01250Ribosomal protein S6InterproscanJBrowse
MCOMPENSODKP00000019870.1PF01250Ribosomal protein S6InterproscanJBrowse
MDICHENSYDOP00000046477.1PF01250Ribosomal protein S6InterproscanJBrowse
MEFFLENSTIFP00000031818.1PF01250Ribosomal protein S6InterproscanJBrowse
MFOLIXP_068698633.1PF01250Ribosomal protein S6InterproscanJBrowse
MGRISANN36144-RAPF01250Ribosomal protein S6InterproscanJBrowse
MGRISANN33098-RAPF01250Ribosomal protein S6InterproscanJBrowse
MGRISANN21678-RAPF01250Ribosomal protein S6InterproscanJBrowse
MGRISANN35214-RAPF01250Ribosomal protein S6InterproscanJBrowse
MHONGEVM0014266.1PF01250Ribosomal protein S6InterproscanJBrowse
MLORDENSSYXP00000011133.1PF01250Ribosomal protein S6InterproscanJBrowse
MMEANENSVBPP00000022743.1PF01250Ribosomal protein S6InterproscanJBrowse
MMURIBRAKERXEIP00000048913.1PF01250Ribosomal protein S6InterproscanJBrowse
MPAPUBRAKERKYLP00000001993.1PF01250Ribosomal protein S6InterproscanJBrowse
MSENAENSVTRP00000028133.1PF01250Ribosomal protein S6InterproscanJBrowse
MSENIENSDTNP00000015555.1PF01250Ribosomal protein S6InterproscanJBrowse
MSENIENSDTNP00000015037.1PF01250Ribosomal protein S6InterproscanJBrowse
MSENIENSDTNP00000012209.1PF01250Ribosomal protein S6InterproscanJBrowse
MSQUAKAF1741142.1PF01250Ribosomal protein S6InterproscanJBrowse
NSEPTANN23990-RAPF01250Ribosomal protein S6InterproscanJBrowse
NVECTXP_001636085.1PF01250Ribosomal protein S6InterproscanJBrowse
OARBUENSPTBP00000028630.1PF01250Ribosomal protein S6InterproscanJBrowse
OFAVEXP_020622903.1PF01250Ribosomal protein S6InterproscanJBrowse
OFRANXP_081317733.1PF01250Ribosomal protein S6InterproscanJBrowse
OPATAKAL9968500.1PF01250Ribosomal protein S6InterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g11757.t1PF01250Ribosomal protein S6InterproscanJBrowse
PAUSTpaus_s0140.g29.t1PF01250Ribosomal protein S6InterproscanJBrowse
PCLAVCAB4013766.1PF01250Ribosomal protein S6InterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g32485.t1PF01250Ribosomal protein S6InterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g32479.t1PF01250Ribosomal protein S6InterproscanJBrowse
PDAMIRMX55383.1PF01250Ribosomal protein S6InterproscanJBrowse
PDIVAENSHHBP00000015194.1PF01250Ribosomal protein S6InterproscanJBrowse
PDIVAENSHHBP00000015192.1PF01250Ribosomal protein S6InterproscanJBrowse
PEVERCAH3194494.1PF01250Ribosomal protein S6InterproscanJBrowse
PGRISENSPYFP00000031954.1PF01250Ribosomal protein S6InterproscanJBrowse
PGRISENSPYFP00000031971.1PF01250Ribosomal protein S6InterproscanJBrowse
PLOBAENSNQRP00000031874.1PF01250Ribosomal protein S6InterproscanJBrowse
PLOBAENSNQRP00000031704.1PF01250Ribosomal protein S6InterproscanJBrowse
PLUTEXP_073227518.1PF01250Ribosomal protein S6InterproscanJBrowse
PMEANCAH3121109.1PF01250Ribosomal protein S6InterproscanJBrowse
PMIZIc0349.g013.t1.p1PF01250Ribosomal protein S6InterproscanJBrowse
PNOCTENSXLYP00000029036.1PF01250Ribosomal protein S6InterproscanJBrowse
PPAPIPpa0G038610PF01250Ribosomal protein S6InterproscanJBrowse
PPENNENSDKPP00000003809.1PF01250Ribosomal protein S6InterproscanJBrowse
PPENNENSDKPP00000003823.1PF01250Ribosomal protein S6InterproscanJBrowse
PRUSENSGYQP00005001416.1PF01250Ribosomal protein S6InterproscanJBrowse
PSINE1g15819.t1PF01250Ribosomal protein S6InterproscanJBrowse
PSINE2evm.model.contig_62422.1PF01250Ribosomal protein S6InterproscanJBrowse
PSPECpspe_0.1.m1.15069.m1PF01250Ribosomal protein S6InterproscanJBrowse
PUMBRc0471.g004.t1PF01250Ribosomal protein S6InterproscanJBrowse
PVERRXP_058967012.2PF01250Ribosomal protein S6InterproscanJBrowse
PXISHHK74SY85_g18115PF01250Ribosomal protein S6InterproscanJBrowse
RESCUXP_065057326.1PF01250Ribosomal protein S6InterproscanJBrowse
RFLORENSORFP00005052125.1PF01250Ribosomal protein S6InterproscanJBrowse
RFLORENSORFP00005006241.1PF01250Ribosomal protein S6InterproscanJBrowse
RFLORENSORFP00005006249.1PF01250Ribosomal protein S6InterproscanJBrowse
ROSCUENSJQFP00000012916.1PF01250Ribosomal protein S6InterproscanJBrowse
SCALLNY_Scal100_v1.37436.1PF01250Ribosomal protein S6InterproscanJBrowse
SINTEENSDDJP00000027911.1PF01250Ribosomal protein S6InterproscanJBrowse
SMALAENSXQXP00000004535.1PF01250Ribosomal protein S6InterproscanJBrowse
SPISTPFX34103.1PF01250Ribosomal protein S6InterproscanJBrowse
SRADIENSTHXP00000005658.1PF01250Ribosomal protein S6InterproscanJBrowse
SSIDEFUN_016651-T1PF01250Ribosomal protein S6InterproscanJBrowse
TCOCCTcoG017986.mRNA1PF01250Ribosomal protein S6InterproscanJBrowse
TDOHRTur_r2.0_p0087.1.g172.t1PF01250Ribosomal protein S6InterproscanJBrowse
TKITAKII62438.1PF01250Ribosomal protein S6InterproscanJBrowse
TMAIPg5675.t1PF01250Ribosomal protein S6InterproscanJBrowse
TRENIENSHNZP00000021899.1PF01250Ribosomal protein S6InterproscanJBrowse
TRUBRBRAKERIOWP00000014104.1PF01250Ribosomal protein S6InterproscanJBrowse
TSTEPBRAKERFUXP00000043856.1PF01250Ribosomal protein S6InterproscanJBrowse
XSPXP_046849056.1PF01250Ribosomal protein S6InterproscanJBrowse

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