Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 163 gene–annotation pairs matching PF08675 across 148 genomes · 7141 ms.

Species with hits:CGRAC1 3HSYMB 2ASP3 2CMOSA 2ANASU 2APOCU 2ECAVO 2DLINE 2DCRIB 2PNOCT 2AMEDI 2AYONG 2DAXIF 2BWELL 2MDICH 2CSALA 2EVERR 2AMYRI 2NSEPT 2ALIUI 2HECHI 2NNOMU 2HOCTO 2TSP 2HVIRI 2TRUBR 2MCACT 2MMEAN 1PCRUS 1MGRIS 1PCOMP 1PCLAV 1MLORD 1PACUT 1MMURI 1PAUST 1MPAPU 1NVECT 1MSENA 1OPATA 1MSENI 1OFRAN 1OFAVE 1OARBU 1PCYLI 1PLOBA 1PDAMI 1RESCU 1TSTEP 1TRENI 1TMAIP 1TDOHR 1TCOCC 1SSIDE 1SRADI 1SPIST 1SMALA 1SINTE 1SCALL 1ROSCU 1RFLOR 1PXISH 1PDIVA 1PVERR 1PUMBR 1PSPEC 1PSINE1 1PRUS 1PPENN 1PPAPI 1PMIZI 1PMEAN 1PLUTE 1PHARR 1PGRIS 1PEVER 1MFOLI 1AACUM 1MEFFL 1AINTE 1ATENE 1ASPAT 1ASP2 1ASP1 1ASELA 1APULC 1APALM 1AMURI 1AMILL 1AMICR 1ALORI 1AIDSS 1AXANT 1AHYAC 1AHEMP 1AGEMM 1AFLOR 1AEQUI 1AECHI 1ADIGI 1ACYTH 1ACERV 1AAWI 1AAUST 1AAURI2 1ATENU 1BCFM 1MCOMP 1EHORR 1MCAPR 1MAURE 1MALCI 1LSCAB 1LSARM 1LPERT 1AAURI1 1HIMPE 1HCOER 1GFASC 1FANCO 1EDIAP 1CCOCK 1DPERT 1DGIGA 1DCYLI 1CSP2 1CSP1 1CQUIN 1CNATA 1CJARD 1CHEMI 1CGRAC2 1CGIGA 1CCRUX 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0197.g3.t1PF08675RNA binding domainInterproscanJBrowse
AAURI1scaffold145.g57.t1PF08675RNA binding domainInterproscanJBrowse
AAURI2scaffold314.g1.t1PF08675RNA binding domainInterproscanJBrowse
AAUSTENSKKQP00000012529.1PF08675RNA binding domainInterproscanJBrowse
AAWIaawi_s0024.g16.t1PF08675RNA binding domainInterproscanJBrowse
ACERVKAK2552489.1PF08675RNA binding domainInterproscanJBrowse
ACYTHacyt_s0267.g9.t1PF08675RNA binding domainInterproscanJBrowse
ADIGIg24409.t1PF08675RNA binding domainInterproscanJBrowse
AECHIaech_s0013.g125.t1PF08675RNA binding domainInterproscanJBrowse
AEQUIEGACTEQ4350049975-PAPF08675RNA binding domainInterproscanJBrowse
AFLORaflo_s0046.g12.t1PF08675RNA binding domainInterproscanJBrowse
AGEMMagem_s0022.g47.t1PF08675RNA binding domainInterproscanJBrowse
AHEMPAhemp_017624-T1PF08675RNA binding domainInterproscanJBrowse
AHYACahya_s0219.g24.t1PF08675RNA binding domainInterproscanJBrowse
AIDSSalvinactis_v1_g1055PF08675RNA binding domainInterproscanJBrowse
AINTEaint_s0386.g20.t1PF08675RNA binding domainInterproscanJBrowse
ALIUIgene11358.t2PF08675RNA binding domainInterproscanJBrowse
ALIUIgene11358.t1PF08675RNA binding domainInterproscanJBrowse
ALORIalor_g4286.t1PF08675RNA binding domainInterproscanJBrowse
AMEDIENSQPTP00000002571.1PF08675RNA binding domainInterproscanJBrowse
AMEDIENSQPTP00000044985.1PF08675RNA binding domainInterproscanJBrowse
AMICRamic_s0132.g17.t1PF08675RNA binding domainInterproscanJBrowse
AMILLXP_029182658.2PF08675RNA binding domainInterproscanJBrowse
AMURIamur_s0378.g19.t1PF08675RNA binding domainInterproscanJBrowse
AMYRIBRAKERYMEP00000001683.1PF08675RNA binding domainInterproscanJBrowse
AMYRIg34383.t1.1PF08675RNA binding domainInterproscanJBrowse
ANASUanas_s2653.g1.t1PF08675RNA binding domainInterproscanJBrowse
ANASUanas_s0233.g9.t1PF08675RNA binding domainInterproscanJBrowse
APALMXP_074628517.1PF08675RNA binding domainInterproscanJBrowse
APOCUevm.model.Ap3.836PF08675RNA binding domainInterproscanJBrowse
APOCUevm.model.Ap11.1026PF08675RNA binding domainInterproscanJBrowse
APULCFUN_018521-T1PF08675RNA binding domainInterproscanJBrowse
ASELAasel_s0076.g36.t1PF08675RNA binding domainInterproscanJBrowse
ASP1Acti_013610-T1PF08675RNA binding domainInterproscanJBrowse
ASP2Actinostola_04164PF08675RNA binding domainInterproscanJBrowse
ASP34_ENSDKXP00000027905.1PF08675RNA binding domainInterproscanJBrowse
ASP34_ENSDKXP00000027925.1PF08675RNA binding domainInterproscanJBrowse
ASPATENSEWQP00005035528.1PF08675RNA binding domainInterproscanJBrowse
ATENEXP_031550704.1PF08675RNA binding domainInterproscanJBrowse
ATENUaten_s0052.g152.t1PF08675RNA binding domainInterproscanJBrowse
AXANTENSOJPP00000037247.1PF08675RNA binding domainInterproscanJBrowse
AYONGayon_s0006.g53.t1PF08675RNA binding domainInterproscanJBrowse
AYONGayon_s0006.g51.t1PF08675RNA binding domainInterproscanJBrowse
BCFMM_g15406.t1PF08675RNA binding domainInterproscanJBrowse
BWELLBRAKERLUSP00000009459.1PF08675RNA binding domainInterproscanJBrowse
BWELLg18802.t1.1PF08675RNA binding domainInterproscanJBrowse
CCOCKENSQNNP00000016253.1PF08675RNA binding domainInterproscanJBrowse
CCRUXg1473.t1PF08675RNA binding domainInterproscanJBrowse
CGIGAENSKFPP00000021934.1PF08675RNA binding domainInterproscanJBrowse
CGRAC1ENSFVQP00000006282.1PF08675RNA binding domainInterproscanJBrowse
CGRAC1ENSFVQP00000006291.1PF08675RNA binding domainInterproscanJBrowse
CGRAC1ENSFVQP00000006286.1PF08675RNA binding domainInterproscanJBrowse
CGRAC2BRAKERTYJP00000026097.1PF08675RNA binding domainInterproscanJBrowse
CHEMIXP_066920901.1PF08675RNA binding domainInterproscanJBrowse
CJARDENSAVKP00000017220.1PF08675RNA binding domainInterproscanJBrowse
CMOSAENSSJYP00000006887.1PF08675RNA binding domainInterproscanJBrowse
CMOSAENSSJYP00000006908.1PF08675RNA binding domainInterproscanJBrowse
CNATAFUN_010591-T1PF08675RNA binding domainInterproscanJBrowse
CQUINevm.model.HiC_scaffold_28.100PF08675RNA binding domainInterproscanJBrowse
CSALAENSOFVP00000013477.1PF08675RNA binding domainInterproscanJBrowse
CSALAENSOFVP00000013470.1PF08675RNA binding domainInterproscanJBrowse
CSP1Csp0G346130PF08675RNA binding domainInterproscanJBrowse
CSP2P_ENSNWCP00000025852.1PF08675RNA binding domainInterproscanJBrowse
DAXIFENSXFYP00000016015.1PF08675RNA binding domainInterproscanJBrowse
DAXIFENSXFYP00000016009.1PF08675RNA binding domainInterproscanJBrowse
DCRIBBRAKERRLHP00000045562.1PF08675RNA binding domainInterproscanJBrowse
DCRIBg39345.t1.1PF08675RNA binding domainInterproscanJBrowse
DCYLIFUN_008997-T1PF08675RNA binding domainInterproscanJBrowse
DGIGAXP_028393446.1PF08675RNA binding domainInterproscanJBrowse
DLINEENSDLIP00000004938.1PF08675RNA binding domainInterproscanJBrowse
DLINEENSDLIP00000004943.1PF08675RNA binding domainInterproscanJBrowse
DPERTKAJ7354848.1PF08675RNA binding domainInterproscanJBrowse
ECAVOENSLDHP00000038276.1PF08675RNA binding domainInterproscanJBrowse
ECAVOENSLDHP00000038271.1PF08675RNA binding domainInterproscanJBrowse
EDIAPKXJ17814.1PF08675RNA binding domainInterproscanJBrowse
EHORRENSJVNP00000015623.1PF08675RNA binding domainInterproscanJBrowse
EVERRENSNOVP00005042101.1PF08675RNA binding domainInterproscanJBrowse
EVERRENSNOVP00005042094.1PF08675RNA binding domainInterproscanJBrowse
FANCOeanc_s019.g0340.t1PF08675RNA binding domainInterproscanJBrowse
GFASCgfas1.m1.18516.m1PF08675RNA binding domainInterproscanJBrowse
HCOERENSBQFP00000016404.1PF08675RNA binding domainInterproscanJBrowse
HECHIENSDJXP00000027227.1PF08675RNA binding domainInterproscanJBrowse
HECHIENSDJXP00000027219.1PF08675RNA binding domainInterproscanJBrowse
HIMPEevm.model.Chr06.979PF08675RNA binding domainInterproscanJBrowse
HOCTOBRAKERHOCP00005010150.1PF08675RNA binding domainInterproscanJBrowse
HOCTOg15858.t1.1PF08675RNA binding domainInterproscanJBrowse
HSYMBHSymV2.0_g13.22659_t1PF08675RNA binding domainInterproscanJBrowse
HSYMBHSymV2.0_g10.19053_t1PF08675RNA binding domainInterproscanJBrowse
HVIRIg2135.t1.1PF08675RNA binding domainInterproscanJBrowse
HVIRIBRAKERKREP00000002011.1PF08675RNA binding domainInterproscanJBrowse
LPERTOS493_029854-T1PF08675RNA binding domainInterproscanJBrowse
LSARMENSAPQP00000039378.1PF08675RNA binding domainInterproscanJBrowse
LSCABANN32872-RAPF08675RNA binding domainInterproscanJBrowse
MALCIENSCIQP00000019424.1PF08675RNA binding domainInterproscanJBrowse
MAUREENSIHXP00000011021.1PF08675RNA binding domainInterproscanJBrowse
MCACTg28164.t1.1PF08675RNA binding domainInterproscanJBrowse
MCACTBRAKERNUSP00000027104.1PF08675RNA binding domainInterproscanJBrowse
MCAPRXP_068752199.1PF08675RNA binding domainInterproscanJBrowse
MCOMPENSODKP00000034466.1PF08675RNA binding domainInterproscanJBrowse
MDICHENSYDOP00000035283.1PF08675RNA binding domainInterproscanJBrowse
MDICHENSYDOP00000035288.1PF08675RNA binding domainInterproscanJBrowse
MEFFLENSTIFP00000012112.1PF08675RNA binding domainInterproscanJBrowse
MFOLIXP_068687881.1PF08675RNA binding domainInterproscanJBrowse
MGRISANN17817-RAPF08675RNA binding domainInterproscanJBrowse
MLORDENSSYXP00000019008.1PF08675RNA binding domainInterproscanJBrowse
MMEANENSVBPP00000039381.1PF08675RNA binding domainInterproscanJBrowse
MMURIBRAKERXEIP00000022948.1PF08675RNA binding domainInterproscanJBrowse
MPAPUBRAKERKYLP00000025181.1PF08675RNA binding domainInterproscanJBrowse
MSENAENSVTRP00000015290.1PF08675RNA binding domainInterproscanJBrowse
MSENIENSDTNP00000018968.1PF08675RNA binding domainInterproscanJBrowse
NNOMUg4320.t1.1PF08675RNA binding domainInterproscanJBrowse
NNOMUBRAKERMNPP00000009474.1PF08675RNA binding domainInterproscanJBrowse
NSEPTANN10790-RAPF08675RNA binding domainInterproscanJBrowse
NSEPTANN19714-RAPF08675RNA binding domainInterproscanJBrowse
NVECTXP_001634577.2PF08675RNA binding domainInterproscanJBrowse
OARBUENSPTBP00000013003.1PF08675RNA binding domainInterproscanJBrowse
OFAVEXP_020622574.1PF08675RNA binding domainInterproscanJBrowse
OFRANXP_081309507.1PF08675RNA binding domainInterproscanJBrowse
OPATAKAL9958407.1PF08675RNA binding domainInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g449.t1PF08675RNA binding domainInterproscanJBrowse
PAUSTpaus_s0104.g42.t1PF08675RNA binding domainInterproscanJBrowse
PCLAVCAB4034971.1PF08675RNA binding domainInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g20644.t1PF08675RNA binding domainInterproscanJBrowse
PCRUSPcrG026455.mRNA1PF08675RNA binding domainInterproscanJBrowse
PCYLIENSZOFP00000014038.1PF08675RNA binding domainInterproscanJBrowse
PDAMIRMX40991.1PF08675RNA binding domainInterproscanJBrowse
PDIVAENSHHBP00000009882.1PF08675RNA binding domainInterproscanJBrowse
PEVERCAH3170549.1PF08675RNA binding domainInterproscanJBrowse
PGRISENSPYFP00000029825.1PF08675RNA binding domainInterproscanJBrowse
PHARRKAM7448237.1PF08675RNA binding domainInterproscanJBrowse
PLOBAENSNQRP00000026882.1PF08675RNA binding domainInterproscanJBrowse
PLUTEXP_073230836.1PF08675RNA binding domainInterproscanJBrowse
PMEANCAH3132065.1PF08675RNA binding domainInterproscanJBrowse
PMIZIc0643.g007.t1.p1PF08675RNA binding domainInterproscanJBrowse
PNOCTENSXLYP00000016152.1PF08675RNA binding domainInterproscanJBrowse
PNOCTENSXLYP00000016165.1PF08675RNA binding domainInterproscanJBrowse
PPAPIPpa0G212820PF08675RNA binding domainInterproscanJBrowse
PPENNENSDKPP00000040227.1PF08675RNA binding domainInterproscanJBrowse
PRUSENSGYQP00005011330.1PF08675RNA binding domainInterproscanJBrowse
PSINE1g195.t1PF08675RNA binding domainInterproscanJBrowse
PSPECpspe_0.1.m1.55059.m1PF08675RNA binding domainInterproscanJBrowse
PUMBRc0004.g004.t1PF08675RNA binding domainInterproscanJBrowse
PVERRXP_058945931.2PF08675RNA binding domainInterproscanJBrowse
PXISHHK74SY85_g996PF08675RNA binding domainInterproscanJBrowse
RESCUXP_065065727.1PF08675RNA binding domainInterproscanJBrowse
RFLORENSORFP00005008461.1PF08675RNA binding domainInterproscanJBrowse
ROSCUENSJQFP00000007414.1PF08675RNA binding domainInterproscanJBrowse
SCALLNY_Scal100_v1.1489.1PF08675RNA binding domainInterproscanJBrowse
SINTEENSDDJP00000040806.1PF08675RNA binding domainInterproscanJBrowse
SMALAENSXQXP00000016291.1PF08675RNA binding domainInterproscanJBrowse
SPISTPFX22311.1PF08675RNA binding domainInterproscanJBrowse
SRADIENSTHXP00000025242.1PF08675RNA binding domainInterproscanJBrowse
SSIDEFUN_053715-T1PF08675RNA binding domainInterproscanJBrowse
TCOCCTcoG013273.mRNA1PF08675RNA binding domainInterproscanJBrowse
TDOHRTur_r2.0_p0199.1.g31489.t1PF08675RNA binding domainInterproscanJBrowse
TMAIPg6564.t1PF08675RNA binding domainInterproscanJBrowse
TRENIENSHNZP00000011727.1PF08675RNA binding domainInterproscanJBrowse
TRUBRg4837.t1.1PF08675RNA binding domainInterproscanJBrowse
TRUBRBRAKERIOWP00000001678.1PF08675RNA binding domainInterproscanJBrowse
TSPClavulariidae_g2036PF08675RNA binding domainInterproscanJBrowse
TSPClavulariidae_g2038PF08675RNA binding domainInterproscanJBrowse
TSTEPBRAKERFUXP00000044538.1PF08675RNA binding domainInterproscanJBrowse
XSPXP_046859640.1PF08675RNA binding domainInterproscanJBrowse

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