Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 165 gene–annotation pairs matching PF01393 across 148 genomes · 9725 ms.

Species with hits:HVIRI 4AMEDI 4HECHI 3RESCU 3MAURE 3DLINE 3HCOER 3CCOCK 2HOCTO 2AMYRI 2PCLAV 2NNOMU 2PNOCT 2EVERR 2ASPAT 2BWELL 2CGIGA 2ALORI 2ECAVO 2RFLOR 2ROSCU 2SCALL 2SMALA 2SRADI 2AEQUI 2DCRIB 2DAXIF 2MCACT 2AXANT 2OFRAN 1OPATA 1PACUT 1OFAVE 1MVIRU 1OARBU 1NVECT 1NSEPT 1MSENI 1MSENA 1MPAPU 1MMURI 1MLORD 1MFOLI 1PAUST 1AACUM 1PCOMP 1PRUS 1TSTEP 1TRENI 1TMAIP 1TDOHR 1TCOCC 1SSIDE 1SPIST 1PXISH 1PVERR 1PUMBR 1PSINE1 1PPENN 1PCRUS 1PPAPI 1PMIZI 1PMEAN 1PLUTE 1PLOBA 1PHARR 1PGRIS 1MDICH 1PEVER 1PDIVA 1PDAMI 1PCYLI 1MEFFL 1HOLIG 1MCOMP 1ALIUI 1ASP3 1ASP2 1ASELA 1APULC 1APOCU 1APALM 1ANASU 1AMURI 1AMILL 1AMICR 1AINTE 1ATENU 1AIDSS 1AHYAC 1AHEMP 1AGEMM 1AFLOR 1AECHI 1ADIGI 1ACERV 1AAWI 1AAUST 1AAURI2 1ATENE 1AYONG 1MCAPR 1EDIAP 1MALCI 1LSARM 1LPERT 1HVULG 1HSYMB 1AAURI1 1HIMPE 1GFASC 1FANCO 1EHORR 1DPERT 1BCFM 1DGIGA 1CXAMA 1CSP2 1CSP1 1CSALA 1CMOSA 1CJARD 1CHEMI 1CGRAC2 1CGRAC1 1CCRUX 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0052.g61.t1PF01393Chromo shadow domainInterproscanJBrowse
AAURI1scaffold326.g5.t1PF01393Chromo shadow domainInterproscanJBrowse
AAURI2scaffold1467.g3.t1PF01393Chromo shadow domainInterproscanJBrowse
AAUSTENSKKQP00000041714.1PF01393Chromo shadow domainInterproscanJBrowse
AAWIaawi_s0034.g104.t1PF01393Chromo shadow domainInterproscanJBrowse
ACERVKAK2564766.1PF01393Chromo shadow domainInterproscanJBrowse
ADIGIg18608.t1PF01393Chromo shadow domainInterproscanJBrowse
AECHIaech_s0040.g48.t1PF01393Chromo shadow domainInterproscanJBrowse
AEQUIEGACTEQ4350011308-PAPF01393Chromo shadow domainInterproscanJBrowse
AEQUIEGACTEQ4350031413-PAPF01393Chromo shadow domainInterproscanJBrowse
AFLORaflo_s0416.g22.t1PF01393Chromo shadow domainInterproscanJBrowse
AGEMMagem_s0006.g73.t1PF01393Chromo shadow domainInterproscanJBrowse
AHEMPAhemp_002681-T1PF01393Chromo shadow domainInterproscanJBrowse
AHYACahya_s0221.g10.t1PF01393Chromo shadow domainInterproscanJBrowse
AIDSSalvinactis_v1_g176PF01393Chromo shadow domainInterproscanJBrowse
AINTEaint_s0005.g31.t1PF01393Chromo shadow domainInterproscanJBrowse
ALIUIgene11617.t1PF01393Chromo shadow domainInterproscanJBrowse
ALORIalor_g13240.t1PF01393Chromo shadow domainInterproscanJBrowse
ALORIalor_g365.t1PF01393Chromo shadow domainInterproscanJBrowse
AMEDIENSQPTP00000044724.1PF01393Chromo shadow domainInterproscanJBrowse
AMEDIENSQPTP00000003833.1PF01393Chromo shadow domainInterproscanJBrowse
AMEDIENSQPTP00000003843.1PF01393Chromo shadow domainInterproscanJBrowse
AMEDIENSQPTP00000044731.1PF01393Chromo shadow domainInterproscanJBrowse
AMICRamic_s0089.g61.t1PF01393Chromo shadow domainInterproscanJBrowse
AMILLXP_029187864.1PF01393Chromo shadow domainInterproscanJBrowse
AMURIamur_s0038.g47.t1PF01393Chromo shadow domainInterproscanJBrowse
AMYRIg9651.t1.1PF01393Chromo shadow domainInterproscanJBrowse
AMYRIBRAKERYMEP00000030195.1PF01393Chromo shadow domainInterproscanJBrowse
ANASUanas_s0263.g26.t1PF01393Chromo shadow domainInterproscanJBrowse
APALMXP_074622744.1PF01393Chromo shadow domainInterproscanJBrowse
APOCUevm.model.Ap7.151PF01393Chromo shadow domainInterproscanJBrowse
APULCFUN_026032-T1PF01393Chromo shadow domainInterproscanJBrowse
ASELAasel_s0028.g23.t1PF01393Chromo shadow domainInterproscanJBrowse
ASP2Actinostola_05557PF01393Chromo shadow domainInterproscanJBrowse
ASP34_ENSDKXP00000024936.1PF01393Chromo shadow domainInterproscanJBrowse
ASPATENSEWQP00005044631.1PF01393Chromo shadow domainInterproscanJBrowse
ASPATENSEWQP00005044641.1PF01393Chromo shadow domainInterproscanJBrowse
ATENEXP_031560643.1PF01393Chromo shadow domainInterproscanJBrowse
ATENUaten_s0277.g4.t1PF01393Chromo shadow domainInterproscanJBrowse
AXANTENSOJPP00000038270.1PF01393Chromo shadow domainInterproscanJBrowse
AXANTENSOJPP00000038276.1PF01393Chromo shadow domainInterproscanJBrowse
AYONGayon_s0006.g252.t1PF01393Chromo shadow domainInterproscanJBrowse
BCFMM_g7233.t1PF01393Chromo shadow domainInterproscanJBrowse
BWELLBRAKERLUSP00000026663.1PF01393Chromo shadow domainInterproscanJBrowse
BWELLg12397.t1.1PF01393Chromo shadow domainInterproscanJBrowse
CCOCKENSQNNP00000022745.1PF01393Chromo shadow domainInterproscanJBrowse
CCOCKENSQNNP00000022747.1PF01393Chromo shadow domainInterproscanJBrowse
CCRUXg264.t1PF01393Chromo shadow domainInterproscanJBrowse
CGIGAENSKFPP00000019018.1PF01393Chromo shadow domainInterproscanJBrowse
CGIGAENSKFPP00000019026.1PF01393Chromo shadow domainInterproscanJBrowse
CGRAC1ENSFVQP00000020010.1PF01393Chromo shadow domainInterproscanJBrowse
CGRAC2BRAKERTYJP00000003103.1PF01393Chromo shadow domainInterproscanJBrowse
CHEMIXP_066934199.1PF01393Chromo shadow domainInterproscanJBrowse
CJARDENSAVKP00000034275.1PF01393Chromo shadow domainInterproscanJBrowse
CMOSAENSSJYP00000008256.1PF01393Chromo shadow domainInterproscanJBrowse
CSALAENSOFVP00000024223.1PF01393Chromo shadow domainInterproscanJBrowse
CSP1Csp0G381820PF01393Chromo shadow domainInterproscanJBrowse
CSP2P_ENSNWCP00000019762.1PF01393Chromo shadow domainInterproscanJBrowse
CXAMACxam_g7238.t1PF01393Chromo shadow domainInterproscanJBrowse
DAXIFENSXFYP00000035125.1PF01393Chromo shadow domainInterproscanJBrowse
DAXIFENSXFYP00000035138.1PF01393Chromo shadow domainInterproscanJBrowse
DCRIBg40548.t1.1PF01393Chromo shadow domainInterproscanJBrowse
DCRIBBRAKERRLHP00000028146.1PF01393Chromo shadow domainInterproscanJBrowse
DGIGAXP_028404907.1PF01393Chromo shadow domainInterproscanJBrowse
DLINEENSDLIP00000002702.1PF01393Chromo shadow domainInterproscanJBrowse
DLINEENSDLIP00000002710.1PF01393Chromo shadow domainInterproscanJBrowse
DLINEENSDLIP00000002692.1PF01393Chromo shadow domainInterproscanJBrowse
DPERTKAJ7369735.1PF01393Chromo shadow domainInterproscanJBrowse
ECAVOENSLDHP00000029734.1PF01393Chromo shadow domainInterproscanJBrowse
ECAVOENSLDHP00000001894.1PF01393Chromo shadow domainInterproscanJBrowse
EDIAPKXJ18593.1PF01393Chromo shadow domainInterproscanJBrowse
EHORRENSJVNP00000029568.1PF01393Chromo shadow domainInterproscanJBrowse
EVERRENSNOVP00005020185.1PF01393Chromo shadow domainInterproscanJBrowse
EVERRENSNOVP00005020167.1PF01393Chromo shadow domainInterproscanJBrowse
FANCOeanc_s024.g0307.t1PF01393Chromo shadow domainInterproscanJBrowse
GFASCgfas1.m1.11243.m1PF01393Chromo shadow domainInterproscanJBrowse
HCOERENSBQFP00000013008.1PF01393Chromo shadow domainInterproscanJBrowse
HCOERENSBQFP00000012998.1PF01393Chromo shadow domainInterproscanJBrowse
HCOERENSBQFP00000013003.1PF01393Chromo shadow domainInterproscanJBrowse
HECHIENSDJXP00000029851.1PF01393Chromo shadow domainInterproscanJBrowse
HECHIENSDJXP00000029843.1PF01393Chromo shadow domainInterproscanJBrowse
HECHIENSDJXP00000029868.1PF01393Chromo shadow domainInterproscanJBrowse
HIMPEevm.model.Chr02.2271PF01393Chromo shadow domainInterproscanJBrowse
HOCTOBRAKERHOCP00005009586.1PF01393Chromo shadow domainInterproscanJBrowse
HOCTOg14957.t1.1PF01393Chromo shadow domainInterproscanJBrowse
HOLIGHOLI00732.G12457PF01393Chromo shadow domainInterproscanJBrowse
HSYMBHSymV2.0_g12.21920_t1PF01393Chromo shadow domainInterproscanJBrowse
HVIRIBRAKERKREP00000027036.1PF01393Chromo shadow domainInterproscanJBrowse
HVIRIg24602.t1.1PF01393Chromo shadow domainInterproscanJBrowse
HVIRIBRAKERKREP00000021657.1PF01393Chromo shadow domainInterproscanJBrowse
HVIRIg14426.t1.1PF01393Chromo shadow domainInterproscanJBrowse
HVULGXP_065665846.1PF01393Chromo shadow domainInterproscanJBrowse
LPERTOS493_036766-T1PF01393Chromo shadow domainInterproscanJBrowse
LSARMENSAPQP00000023140.1PF01393Chromo shadow domainInterproscanJBrowse
MALCIENSCIQP00000016008.1PF01393Chromo shadow domainInterproscanJBrowse
MAUREENSIHXP00000028811.1PF01393Chromo shadow domainInterproscanJBrowse
MAUREENSIHXP00000028800.1PF01393Chromo shadow domainInterproscanJBrowse
MAUREENSIHXP00000028625.1PF01393Chromo shadow domainInterproscanJBrowse
MCACTg12262.t1.1PF01393Chromo shadow domainInterproscanJBrowse
MCACTBRAKERNUSP00000007894.1PF01393Chromo shadow domainInterproscanJBrowse
MCAPRXP_068741942.1PF01393Chromo shadow domainInterproscanJBrowse
MCOMPENSODKP00000032224.1PF01393Chromo shadow domainInterproscanJBrowse
MDICHENSYDOP00000031581.1PF01393Chromo shadow domainInterproscanJBrowse
MEFFLENSTIFP00000011754.1PF01393Chromo shadow domainInterproscanJBrowse
MFOLIXP_068715624.1PF01393Chromo shadow domainInterproscanJBrowse
MLORDENSSYXP00000000123.1PF01393Chromo shadow domainInterproscanJBrowse
MMURIBRAKERXEIP00000038249.1PF01393Chromo shadow domainInterproscanJBrowse
MPAPUBRAKERKYLP00000015489.1PF01393Chromo shadow domainInterproscanJBrowse
MSENAENSVTRP00000035981.1PF01393Chromo shadow domainInterproscanJBrowse
MSENIENSDTNP00000019247.1PF01393Chromo shadow domainInterproscanJBrowse
MVIRUscaffold24.g26.t1PF01393Chromo shadow domainInterproscanJBrowse
NNOMUg636.t1.1PF01393Chromo shadow domainInterproscanJBrowse
NNOMUBRAKERMNPP00000015194.1PF01393Chromo shadow domainInterproscanJBrowse
NSEPTANN10227-RAPF01393Chromo shadow domainInterproscanJBrowse
NVECTXP_032222318.1PF01393Chromo shadow domainInterproscanJBrowse
OARBUENSPTBP00000038388.1PF01393Chromo shadow domainInterproscanJBrowse
OFAVEXP_020623081.1PF01393Chromo shadow domainInterproscanJBrowse
OFRANXP_081320976.1PF01393Chromo shadow domainInterproscanJBrowse
OPATAKAL9966127.1PF01393Chromo shadow domainInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g28764.t1PF01393Chromo shadow domainInterproscanJBrowse
PAUSTpaus_s4142.g2.t1PF01393Chromo shadow domainInterproscanJBrowse
PCLAVCAB3993067.1PF01393Chromo shadow domainInterproscanJBrowse
PCLAVCAB3993066.1PF01393Chromo shadow domainInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g6565.t1PF01393Chromo shadow domainInterproscanJBrowse
PCRUSPcrG017234.mRNA1PF01393Chromo shadow domainInterproscanJBrowse
PCYLIENSZOFP00000020985.1PF01393Chromo shadow domainInterproscanJBrowse
PDAMIRMX54094.1PF01393Chromo shadow domainInterproscanJBrowse
PDIVAENSHHBP00000023748.1PF01393Chromo shadow domainInterproscanJBrowse
PEVERCAH3161015.1PF01393Chromo shadow domainInterproscanJBrowse
PGRISENSPYFP00000032552.1PF01393Chromo shadow domainInterproscanJBrowse
PHARRKAM7448197.1PF01393Chromo shadow domainInterproscanJBrowse
PLOBAENSNQRP00000046473.1PF01393Chromo shadow domainInterproscanJBrowse
PLUTEXP_073237121.1PF01393Chromo shadow domainInterproscanJBrowse
PMEANCAH3130993.1PF01393Chromo shadow domainInterproscanJBrowse
PMIZIc0312.g014.t1.p1PF01393Chromo shadow domainInterproscanJBrowse
PNOCTENSXLYP00000009944.1PF01393Chromo shadow domainInterproscanJBrowse
PNOCTENSXLYP00000009947.1PF01393Chromo shadow domainInterproscanJBrowse
PPAPIPpa0G291650PF01393Chromo shadow domainInterproscanJBrowse
PPENNENSDKPP00000022594.1PF01393Chromo shadow domainInterproscanJBrowse
PRUSENSGYQP00005025622.1PF01393Chromo shadow domainInterproscanJBrowse
PSINE1g307.t1PF01393Chromo shadow domainInterproscanJBrowse
PUMBRc1736.g003.t1PF01393Chromo shadow domainInterproscanJBrowse
PVERRXP_058953439.1PF01393Chromo shadow domainInterproscanJBrowse
PXISHHK74SY85_g1199PF01393Chromo shadow domainInterproscanJBrowse
RESCUXP_065053324.1PF01393Chromo shadow domainInterproscanJBrowse
RESCUXP_065053325.1PF01393Chromo shadow domainInterproscanJBrowse
RESCUXP_065053326.1PF01393Chromo shadow domainInterproscanJBrowse
RFLORENSORFP00005008289.1PF01393Chromo shadow domainInterproscanJBrowse
RFLORENSORFP00005008276.1PF01393Chromo shadow domainInterproscanJBrowse
ROSCUENSJQFP00000028487.1PF01393Chromo shadow domainInterproscanJBrowse
ROSCUENSJQFP00000028476.1PF01393Chromo shadow domainInterproscanJBrowse
SCALLNY_Scal100_v1.12527.1PF01393Chromo shadow domainInterproscanJBrowse
SCALLNY_Scal100_v1.10026.1PF01393Chromo shadow domainInterproscanJBrowse
SMALAENSXQXP00000005765.1PF01393Chromo shadow domainInterproscanJBrowse
SMALAENSXQXP00000005753.1PF01393Chromo shadow domainInterproscanJBrowse
SPISTPFX32446.1PF01393Chromo shadow domainInterproscanJBrowse
SRADIENSTHXP00000064915.1PF01393Chromo shadow domainInterproscanJBrowse
SRADIENSTHXP00000064919.1PF01393Chromo shadow domainInterproscanJBrowse
SSIDEFUN_038409-T1PF01393Chromo shadow domainInterproscanJBrowse
TCOCCTcoG009979.mRNA1PF01393Chromo shadow domainInterproscanJBrowse
TDOHRTur_r2.0_p0123.1.g2663.t1PF01393Chromo shadow domainInterproscanJBrowse
TMAIPg10066.t1PF01393Chromo shadow domainInterproscanJBrowse
TRENIENSHNZP00000011652.1PF01393Chromo shadow domainInterproscanJBrowse
TSTEPBRAKERFUXP00000036235.1PF01393Chromo shadow domainInterproscanJBrowse
XSPXP_046847221.1PF01393Chromo shadow domainInterproscanJBrowse

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