Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 145 gene–annotation pairs matching PF06093 across 148 genomes · 5108 ms.

Species with hits:DLINE 3PLOBA 3PSPEC 2PMIZI 2PPENN 2PRUS 2ASPAT 2CJARD 2DAXIF 2ROSCU 2SCALL 2SINTE 2LSARM 2MGRIS 2SRADI 2TCOCC 2MEFFL 2TSTEP 2DGIGA 2OARBU 1OFAVE 1NVECT 1OFRAN 1OPATA 1PACUT 1AACUM 1NSEPT 1MSENI 1MSENA 1MMURI 1MMEAN 1MLORD 1MHONG 1MFOLI 1MCAPR 1MCAPI 1MAURE 1PAUST 1PEVER 1PCLAV 1PUMBR 1TRUBR 1TRENI 1TMAIP 1TDOHR 1SSIDE 1SPIST 1SMALA 1RESCU 1PXISH 1PVERR 1PSINE1 1PCOMP 1PPAPI 1PNOCT 1PMEAN 1PLUTE 1PHARR 1PGRIS 1PDIVA 1PDAMI 1PCYLI 1PCRUS 1LSCAB 1HVIRI 1LPERT 1ALORI 1ATENE 1ASP3 1ASP2 1ASP1 1ASELA 1APULC 1APOCU 1APALM 1ANASU 1AMURI 1AMILL 1AMICR 1AINTE 1AXANT 1AIDSS 1AHYAC 1AHEMP 1AGEMM 1AFLOR 1AEQUI 1AECHI 1ADIGI 1ACYTH 1ACERV 1AAWI 1AAUST 1ATENU 1AYONG 1HVULG 1DCYLI 1AAURI1 1HSYMB 1HOLIG 1HOCTO 1HIMPE 1HCOER 1GFASC 1EVERR 1EHORR 1EDIAP 1ECAVO 1DPERT 1DCRIB 1BCFM 1CXAMA 1CSP2 1CSP1 1CSALA 1CQUIN 1CNATA 1CMOSA 1CHEMI 1CGRAC2 1CGRAC1 1CGIGA 1CCRUX 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0130.g39.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AAURI1scaffold81.g62.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AAUSTENSKKQP00000050154.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AAWIaawi_s0142.g6.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ACERVKAK2556128.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ACYTHacyt_s0174.g39.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ADIGIg20283.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AECHIaech_s0010.g225.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AEQUIEGACTEQ4350017348-PAPF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AFLORaflo_s0651.g2.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AGEMMagem_s0060.g2.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AHEMPAhemp_015575-T1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AHYACahya_s0074.g92.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AIDSSalvinactis_v1_g6892PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AINTEaint_s0382.g33.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ALORIalor_g15050.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AMICRamic_s0327.g5.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AMILLXP_029207475.2PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AMURIamur_s0127.g4.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ANASUanas_s0332.g3.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
APALMXP_074636115.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
APOCUevm.model.Ap3.1314PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
APULCFUN_011059-T1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ASELAasel_s0279.g4.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ASP1Acti_042543-T1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ASP2Actinostola_10627PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ASP34_ENSDKXP00000018853.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ASPATENSEWQP00005000265.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ASPATENSEWQP00005046068.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ATENEXP_031558267.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ATENUaten_s0416.g6.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AXANTENSOJPP00000036157.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
AYONGayon_s0004.g13.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
BCFMM_g42090.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CCRUXg157.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CGIGAENSKFPP00000024067.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CGRAC1ENSFVQP00000009110.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CGRAC2BRAKERTYJP00000039626.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CHEMIXP_066910103.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CJARDENSAVKP00000037666.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CJARDENSAVKP00000043378.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CMOSAENSSJYP00000004419.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CNATAFUN_006381-T1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CQUINevm.model.HiC_scaffold_32.129PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CSALAENSOFVP00000014878.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CSP1Csp0G034330PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CSP2P_ENSNWCP00000024531.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
CXAMACxam_g22569.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DAXIFENSXFYP00000051527.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DAXIFENSXFYP00000051532.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DCRIBBRAKERRLHP00000030726.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DCYLIFUN_031617-T1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DGIGAXP_028415236.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DGIGAXP_028396691.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DLINEENSDLIP00000017572.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DLINEENSDLIP00000017561.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DLINEENSDLIP00000017566.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
DPERTKAJ7387933.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ECAVOENSLDHP00000045486.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
EDIAPKXJ21529.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
EHORRENSJVNP00000013942.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
EVERRENSNOVP00005036037.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
GFASCgfas1.m1.16610.m1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
HCOERENSBQFP00000044638.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
HIMPEevm.model.Chr04.867PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
HOCTOBRAKERHOCP00005013753.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
HOLIGHOLI01066.G7174PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
HSYMBHSymV2.0_g11.19712_t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
HVIRIBRAKERKREP00000009710.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
HVULGXP_065675603.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
LPERTOS493_001285-T1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
LSARMENSAPQP00000012093.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
LSARMENSAPQP00000012088.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
LSCABANN25432-RAPF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MAUREENSIHXP00000012279.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MCAPIg27533.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MCAPRXP_068748450.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MEFFLENSTIFP00000046806.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MEFFLENSTIFP00000046804.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MFOLIXP_068678245.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MGRISANN24304-RAPF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MGRISANN10164-RAPF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MHONGEVM0003156.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MLORDENSSYXP00000046964.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MMEANENSVBPP00000000410.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MMURIBRAKERXEIP00000027289.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MSENAENSVTRP00000009535.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
MSENIENSDTNP00000003607.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
NSEPTANN12776-RAPF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
NVECTXP_001633975.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
OARBUENSPTBP00000009994.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
OFAVEXP_020616731.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
OFRANXP_081303744.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
OPATAKAL9982148.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g15788.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PAUSTpaus_s0015.g53.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PCLAVCAB3983589.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g10574.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PCRUSPcrG006179.mRNA1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PCYLIENSZOFP00000007559.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PDAMIRMX57845.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PDIVAENSHHBP00000014086.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PEVERCAH3021014.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PGRISENSPYFP00000017001.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PHARRKAM7443012.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PLOBAENSNQRP00000020071.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PLOBAENSNQRP00000020077.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PLOBAENSNQRP00000020063.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PLUTEXP_073257359.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PMEANCAH3108748.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PMIZIc0004.g084.t1.p1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PMIZIc3036.g002.t1.p1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PNOCTENSXLYP00000017638.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PPAPIPpa0G411740PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PPENNENSDKPP00000033116.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PPENNENSDKPP00000033121.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PRUSENSGYQP00005005686.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PRUSENSGYQP00005005698.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PSINE1g11615.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PSPECpspe_0.1.m1.60778.m1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PSPECpspe_0.1.m1.60783.m1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PUMBRc0033.g031.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PVERRXP_058948172.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
PXISHHK74SY85_g5348PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
RESCUXP_065055096.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ROSCUENSJQFP00000020579.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
ROSCUENSJQFP00000020573.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SCALLNY_Scal100_v1.51363.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SCALLNY_Scal100_v1.31801.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SINTEENSDDJP00000009668.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SINTEENSDDJP00000009679.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SMALAENSXQXP00000018953.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SPISTPFX23385.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SRADIENSTHXP00000015673.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SRADIENSTHXP00000015682.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
SSIDEFUN_015622-T1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TCOCCTcoG004363.mRNA1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TCOCCTcoG034093.mRNA1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TDOHRTur_r2.0_p0335.1.g48453.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TMAIPg5252.t1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TRENIENSHNZP00000005525.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TRUBRBRAKERIOWP00000012523.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TSTEPBRAKERFUXP00000046447.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
TSTEPBRAKERFUXP00000011122.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse
XSPXP_046840910.1PF06093Spt4/RpoE2 zinc fingerInterproscanJBrowse

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