Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 189 gene–annotation pairs matching PF00344 across 148 genomes · 5896 ms.

Species with hits:HOLIG 7MGRIS 6ACYTH 4PLOBA 3ASPAT 3OFAVE 2HCOER 2MVIRU 2OARBU 2PNOCT 2PMIZI 2MCAPR 2CCOCK 2MFOLI 2CGRAC1 2PGRIS 2CHEMI 2CJARD 2PEVER 2CSP2 2HIMPE 2MSENA 2AEQUI 2TKITA 2MAURE 2SRADI 2LSARM 2MMURI 2TRUBR 2SINTE 2TSTEP 2HVIRI 2AMEDI 2AMICR 2TDOHR 2OPATA 1PACUT 1MHONG 1PAUST 1MMEAN 1MLORD 1OFRAN 1MPAPU 1NVECT 1NSEPT 1NNOMU 1MSQUA 1MSENI 1PCLAV 1AACUM 1PCOMP 1PXISH 1TSP 1TRENI 1TMAIP 1TCOCC 1SSIDE 1SPIST 1SMALA 1SCALL 1ROSCU 1RFLOR 1RESCU 1PVERR 1PCRUS 1PUMBR 1PSPEC 1PSINE2 1PSINE1 1PRUS 1PPENN 1PPAPI 1PMEAN 1PLUTE 1PDIVA 1PDAMI 1PCYLI 1PHARR 1HVULG 1MEFFL 1AMILL 1AXANT 1ATENU 1ATENE 1ASP3 1ASP1 1ASELA 1APULC 1APOCU 1APALM 1ANASU 1AMYRI 1AMURI 1ALORI 1BCFM 1ALIUI 1AINTE 1AIDSS 1AHYAC 1AHEMP 1AGEMM 1AFLOR 1AECHI 1ADIGI 1ACOER 1ACERV 1AAWI 1AAUST 1AYONG 1BWELL 1MCOMP 1EDIAP 1MCAPI 1MCACT 1MALCI 1LSCAB 1AAURI1 1HSYMB 1HSALM 1HOCTO 1HECHI 1GFASC 1FANCO 1EVERR 1EHORR 1ECAVO 1CCRUX 1DLINE 1DGIGA 1DCYLI 1DCRIB 1DAXIF 1CXAMA 1CSP1 1CSALA 1CQUIN 1CNATA 1CMOSA 1CGRAC2 1CGIGA 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0010.g107.t1PF00344SecYInterproscanJBrowse
AAURI1scaffold302.g3.t1PF00344SecYInterproscanJBrowse
AAUSTENSKKQP00000021190.1PF00344SecYInterproscanJBrowse
AAWIaawi_s0011.g29.t1PF00344SecYInterproscanJBrowse
ACERVKAK2553361.1PF00344SecYInterproscanJBrowse
ACOERevm.model.ptg000003l.1167PF00344SecYInterproscanJBrowse
ACYTHacyt_s0012.g145.t2PF00344SecYInterproscanJBrowse
ACYTHacyt_s0012.g145.t1PF00344SecYInterproscanJBrowse
ACYTHacyt_s0012.g145.t3PF00344SecYInterproscanJBrowse
ACYTHacyt_s0012.g145.t3PF00344SecYInterproscanJBrowse
ADIGIg11892.t1PF00344SecYInterproscanJBrowse
AECHIaech_s0071.g49.t1PF00344SecYInterproscanJBrowse
AEQUIEGACTEQ4350010948-PBPF00344SecYInterproscanJBrowse
AEQUIEGACTEQ4350010948-PAPF00344SecYInterproscanJBrowse
AFLORaflo_s0134.g22.t1PF00344SecYInterproscanJBrowse
AGEMMagem_s0011.g51.t1PF00344SecYInterproscanJBrowse
AHEMPAhemp_017125-T1PF00344SecYInterproscanJBrowse
AHYACahya_s0047.g56.t1PF00344SecYInterproscanJBrowse
AIDSSalvinactis_v1_g20552PF00344SecYInterproscanJBrowse
AINTEaint_s0080.g31.t1PF00344SecYInterproscanJBrowse
ALIUIgene05853.t1PF00344SecYInterproscanJBrowse
ALORIalor_g8375.t1PF00344SecYInterproscanJBrowse
AMEDIENSQPTP00000031083.1PF00344SecYInterproscanJBrowse
AMEDIENSQPTP00000071023.1PF00344SecYInterproscanJBrowse
AMICRamic_s0090.g32.t1PF00344SecYInterproscanJBrowse
AMICRamic_s0090.g32.t2PF00344SecYInterproscanJBrowse
AMILLXP_029199044.1PF00344SecYInterproscanJBrowse
AMURIamur_s0084.g22.t1PF00344SecYInterproscanJBrowse
AMYRIBRAKERYMEP00000015739.1PF00344SecYInterproscanJBrowse
ANASUanas_s0119.g29.t1PF00344SecYInterproscanJBrowse
APALMXP_074620417.1PF00344SecYInterproscanJBrowse
APOCUevm.model.Ap5.2885PF00344SecYInterproscanJBrowse
APULCFUN_006638-T1PF00344SecYInterproscanJBrowse
ASELAasel_s0079.g20.t1PF00344SecYInterproscanJBrowse
ASP1Acti_046385-T1PF00344SecYInterproscanJBrowse
ASP34_ENSDKXP00000007868.1PF00344SecYInterproscanJBrowse
ASPATENSEWQP00005029388.1PF00344SecYInterproscanJBrowse
ASPATENSEWQP00005029379.1PF00344SecYInterproscanJBrowse
ASPATENSEWQP00005029367.1PF00344SecYInterproscanJBrowse
ATENEXP_031551128.1PF00344SecYInterproscanJBrowse
ATENUaten_s0134.g37.t1PF00344SecYInterproscanJBrowse
AXANTENSOJPP00000001091.1PF00344SecYInterproscanJBrowse
AYONGayon_s0090.g65.t1PF00344SecYInterproscanJBrowse
BCFMM_g14935.t1PF00344SecYInterproscanJBrowse
BWELLBRAKERLUSP00000031413.1PF00344SecYInterproscanJBrowse
CCOCKENSQNNP00000022217.1PF00344SecYInterproscanJBrowse
CCOCKENSQNNP00000022210.1PF00344SecYInterproscanJBrowse
CCRUXg284.t1PF00344SecYInterproscanJBrowse
CGIGAENSKFPP00000027796.1PF00344SecYInterproscanJBrowse
CGRAC1ENSFVQP00000005294.1PF00344SecYInterproscanJBrowse
CGRAC1ENSFVQP00000005314.1PF00344SecYInterproscanJBrowse
CGRAC2BRAKERTYJP00000042734.1PF00344SecYInterproscanJBrowse
CHEMIXP_066920219.1PF00344SecYInterproscanJBrowse
CHEMIXP_066929970.1PF00344SecYInterproscanJBrowse
CJARDENSAVKP00000044749.1PF00344SecYInterproscanJBrowse
CJARDENSAVKP00000043105.1PF00344SecYInterproscanJBrowse
CMOSAENSSJYP00000024662.1PF00344SecYInterproscanJBrowse
CNATAFUN_031776-T1PF00344SecYInterproscanJBrowse
CQUINevm.model.HiC_scaffold_13.172PF00344SecYInterproscanJBrowse
CSALAENSOFVP00000035759.1PF00344SecYInterproscanJBrowse
CSP1Csp0G426090PF00344SecYInterproscanJBrowse
CSP2P_ENSNWCP00000014328.1PF00344SecYInterproscanJBrowse
CSP2P_ENSNWCP00000014314.1PF00344SecYInterproscanJBrowse
CXAMACxam_g28940.t1PF00344SecYInterproscanJBrowse
DAXIFENSXFYP00000044390.1PF00344SecYInterproscanJBrowse
DCRIBBRAKERRLHP00000020653.1PF00344SecYInterproscanJBrowse
DCYLIFUN_024572-T1PF00344SecYInterproscanJBrowse
DGIGAXP_028404477.1PF00344SecYInterproscanJBrowse
DLINEENSDLIP00000019807.1PF00344SecYInterproscanJBrowse
ECAVOENSLDHP00000034644.1PF00344SecYInterproscanJBrowse
EDIAPKXJ26504.1PF00344SecYInterproscanJBrowse
EHORRENSJVNP00000002668.1PF00344SecYInterproscanJBrowse
EVERRENSNOVP00005030085.1PF00344SecYInterproscanJBrowse
FANCOeanc_s063.g0130.t1PF00344SecYInterproscanJBrowse
GFASCgfas1.m1.1679.m1PF00344SecYInterproscanJBrowse
HCOERENSBQFP00000040704.1PF00344SecYInterproscanJBrowse
HCOERENSBQFP00000040692.1PF00344SecYInterproscanJBrowse
HECHIENSDJXP00000042056.1PF00344SecYInterproscanJBrowse
HIMPEevm.model.Chr01.1229PF00344SecYInterproscanJBrowse
HIMPEevm.model.Contig128.50PF00344SecYInterproscanJBrowse
HOCTOBRAKERHOCP00005008188.1PF00344SecYInterproscanJBrowse
HOLIGHOLI00232.G57713PF00344SecYInterproscanJBrowse
HOLIGHOLI01498.G36384PF00344SecYInterproscanJBrowse
HOLIGHOLI00002.G19991PF00344SecYInterproscanJBrowse
HOLIGHOLI00014.G10176PF00344SecYInterproscanJBrowse
HOLIGHOLI01529.G35407PF00344SecYInterproscanJBrowse
HOLIGHOLI01498.G36383PF00344SecYInterproscanJBrowse
HOLIGHOLI00001.G52325PF00344SecYInterproscanJBrowse
HSALMKAF0990385.1PF00344SecYInterproscanJBrowse
HSYMBHSymV2.0_g08.13108_t1PF00344SecYInterproscanJBrowse
HVIRIBRAKERKREP00000023758.1PF00344SecYInterproscanJBrowse
HVIRIBRAKERKREP00000000532.1PF00344SecYInterproscanJBrowse
HVULGXP_065668514.1PF00344SecYInterproscanJBrowse
LSARMENSAPQP00000024473.1PF00344SecYInterproscanJBrowse
LSARMENSAPQP00000024492.1PF00344SecYInterproscanJBrowse
LSCABANN22250-RAPF00344SecYInterproscanJBrowse
MALCIENSCIQP00000000757.1PF00344SecYInterproscanJBrowse
MAUREENSIHXP00000005684.1PF00344SecYInterproscanJBrowse
MAUREENSIHXP00000005699.1PF00344SecYInterproscanJBrowse
MCACTBRAKERNUSP00000019158.1PF00344SecYInterproscanJBrowse
MCAPIg16981.t1PF00344SecYInterproscanJBrowse
MCAPRXP_068718788.1PF00344SecYInterproscanJBrowse
MCAPRXP_068718789.1PF00344SecYInterproscanJBrowse
MCOMPENSODKP00000000746.1PF00344SecYInterproscanJBrowse
MEFFLENSTIFP00000012675.1PF00344SecYInterproscanJBrowse
MFOLIXP_068702701.1PF00344SecYInterproscanJBrowse
MFOLIXP_068702642.1PF00344SecYInterproscanJBrowse
MGRISANN29794-RAPF00344SecYInterproscanJBrowse
MGRISANN32763-RAPF00344SecYInterproscanJBrowse
MGRISANN37908-RAPF00344SecYInterproscanJBrowse
MGRISANN28801-RAPF00344SecYInterproscanJBrowse
MGRISANN37399-RAPF00344SecYInterproscanJBrowse
MGRISANN26516-RAPF00344SecYInterproscanJBrowse
MHONGEVM0012280.1PF00344SecYInterproscanJBrowse
MLORDENSSYXP00000007828.1PF00344SecYInterproscanJBrowse
MMEANENSVBPP00000021183.1PF00344SecYInterproscanJBrowse
MMURIBRAKERXEIP00000042497.1PF00344SecYInterproscanJBrowse
MMURIBRAKERXEIP00000041097.1PF00344SecYInterproscanJBrowse
MPAPUBRAKERKYLP00000000590.1PF00344SecYInterproscanJBrowse
MSENAENSVTRP00000041136.1PF00344SecYInterproscanJBrowse
MSENAENSVTRP00000041126.1PF00344SecYInterproscanJBrowse
MSENIENSDTNP00000005166.1PF00344SecYInterproscanJBrowse
MSQUAKAF1745046.1PF00344SecYInterproscanJBrowse
MVIRUscaffold86.g47.t1PF00344SecYInterproscanJBrowse
MVIRUscaffold121.g221.t1PF00344SecYInterproscanJBrowse
NNOMUBRAKERMNPP00000007110.1PF00344SecYInterproscanJBrowse
NSEPTANN02351-RAPF00344SecYInterproscanJBrowse
NVECTXP_001628073.1PF00344SecYInterproscanJBrowse
OARBUENSPTBP00000035461.1PF00344SecYInterproscanJBrowse
OARBUENSPTBP00000043172.1PF00344SecYInterproscanJBrowse
OFAVEXP_020618644.1PF00344SecYInterproscanJBrowse
OFAVEXP_020618643.1PF00344SecYInterproscanJBrowse
OFRANXP_081332768.1PF00344SecYInterproscanJBrowse
OPATAKAL9971537.1PF00344SecYInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g9831.t1PF00344SecYInterproscanJBrowse
PAUSTpaus_s0225.g8.t1PF00344SecYInterproscanJBrowse
PCLAVCAB3995770.1PF00344SecYInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g3987.t1PF00344SecYInterproscanJBrowse
PCRUSPcrG020744.mRNA1PF00344SecYInterproscanJBrowse
PCYLIENSZOFP00000001905.1PF00344SecYInterproscanJBrowse
PDAMIRMX55311.1PF00344SecYInterproscanJBrowse
PDIVAENSHHBP00000009106.1PF00344SecYInterproscanJBrowse
PEVERCAH3196191.1PF00344SecYInterproscanJBrowse
PEVERCAH3196103.1PF00344SecYInterproscanJBrowse
PGRISENSPYFP00000003064.1PF00344SecYInterproscanJBrowse
PGRISENSPYFP00000003078.1PF00344SecYInterproscanJBrowse
PHARRKAM7441160.1PF00344SecYInterproscanJBrowse
PLOBAENSNQRP00000015753.1PF00344SecYInterproscanJBrowse
PLOBAENSNQRP00000015750.1PF00344SecYInterproscanJBrowse
PLOBAENSNQRP00000015740.1PF00344SecYInterproscanJBrowse
PLUTEXP_073253624.1PF00344SecYInterproscanJBrowse
PMEANCAH3045710.1PF00344SecYInterproscanJBrowse
PMIZIc1162.g004.t1.p1PF00344SecYInterproscanJBrowse
PMIZIc0940.g001.t1.p1PF00344SecYInterproscanJBrowse
PNOCTENSXLYP00000022184.1PF00344SecYInterproscanJBrowse
PNOCTENSXLYP00000022196.1PF00344SecYInterproscanJBrowse
PPAPIPpa0G303520PF00344SecYInterproscanJBrowse
PPENNENSDKPP00000004308.1PF00344SecYInterproscanJBrowse
PRUSENSGYQP00005042107.1PF00344SecYInterproscanJBrowse
PSINE1g14795.t1PF00344SecYInterproscanJBrowse
PSINE2evm.model.contig_81258.1PF00344SecYInterproscanJBrowse
PSPECpspe_0.1.m1.24735.m1PF00344SecYInterproscanJBrowse
PUMBRc0127.g029.t1PF00344SecYInterproscanJBrowse
PVERRXP_058950696.1PF00344SecYInterproscanJBrowse
PXISHHK74SY85_g13951PF00344SecYInterproscanJBrowse
RESCUXP_065058630.1PF00344SecYInterproscanJBrowse
RFLORENSORFP00005043118.1PF00344SecYInterproscanJBrowse
ROSCUENSJQFP00000034939.1PF00344SecYInterproscanJBrowse
SCALLNY_Scal100_v1.1029.1PF00344SecYInterproscanJBrowse
SINTEENSDDJP00000036638.1PF00344SecYInterproscanJBrowse
SINTEENSDDJP00000032347.1PF00344SecYInterproscanJBrowse
SMALAENSXQXP00000011406.1PF00344SecYInterproscanJBrowse
SPISTPFX33464.1PF00344SecYInterproscanJBrowse
SRADIENSTHXP00000034824.1PF00344SecYInterproscanJBrowse
SRADIENSTHXP00000034802.1PF00344SecYInterproscanJBrowse
SSIDEFUN_022837-T1PF00344SecYInterproscanJBrowse
TCOCCTcoG003455.mRNA1PF00344SecYInterproscanJBrowse
TDOHRTur_r2.0_p0020.1.g32850.t1PF00344SecYInterproscanJBrowse
TDOHRTur_r2.0_p0041.1.g56035.t1PF00344SecYInterproscanJBrowse
TKITAKII73959.1PF00344SecYInterproscanJBrowse
TKITAKII73960.1PF00344SecYInterproscanJBrowse
TMAIPg3669.t1PF00344SecYInterproscanJBrowse
TRENIENSHNZP00000004397.1PF00344SecYInterproscanJBrowse
TRUBRBRAKERIOWP00000005602.1PF00344SecYInterproscanJBrowse
TRUBRBRAKERIOWP00000001385.1PF00344SecYInterproscanJBrowse
TSPClavulariidae_g23531PF00344SecYInterproscanJBrowse
TSTEPBRAKERFUXP00000009431.1PF00344SecYInterproscanJBrowse
TSTEPBRAKERFUXP00000005890.1PF00344SecYInterproscanJBrowse
XSPXP_046852646.1PF00344SecYInterproscanJBrowse

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