Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 215 gene–annotation pairs matching PF03985 across 148 genomes · 6051 ms.

Species with hits:AMEDI 6AAURI2 5MSENA 5BWELL 4AMYRI 4AAUST 4MCACT 4HOLIG 3PLOBA 3MAURE 3ECAVO 3TRENI 3CQUIN 3ASPAT 3CSP2 3PPENN 2AXANT 2PRUS 2HOCTO 2PNOCT 2PSINE2 2HIMPE 2OARBU 2CGIGA 2DAXIF 2CJARD 2CMOSA 2PGRIS 2PEVER 2MLORD 2HVULG 2ASP2 2DCRIB 2MFOLI 2TRUBR 2EVERR 2SRADI 2SMALA 2SINTE 2AINTE 2SCALL 2ROSCU 2LSARM 2AMILL 2AMURI 2NNOMU 2HVIRI 2NSEPT 2PDAMI 2OPATA 1PACUT 1AACUM 1OFRAN 1OFAVE 1NVECT 1MVIRU 1MSENI 1MPAPU 1PAUST 1PLUTE 1PCLAV 1PXISH 1TSTEP 1TMAIP 1TKITA 1TDOHR 1TCOCC 1SSIDE 1SPIST 1RFLOR 1RESCU 1PVERR 1PCOMP 1PUMBR 1PSPEC 1PSINE1 1PPAPI 1PMIZI 1PMEAN 1PHARR 1PDIVA 1PCYLI 1PCRUS 1MMURI 1HSALM 1MMEAN 1ALIUI 1ATENU 1ATENE 1ASP3 1ASP1 1ASELA 1APULC 1APOCU 1APALM 1ANASU 1AMICR 1ALORI 1AIDSS 1BCFM 1AHYAC 1AHEMP 1AGEMM 1AFLOR 1AEQUI 1AECHI 1ADIGI 1ACYTH 1ACERV 1AAWI 1AAURI1 1AYONG 1CCOCK 1MHONG 1EHORR 1MEFFL 1MCOMP 1MCAPR 1MCAPI 1LPERT 1HSYMB 1AALAT 1HECHI 1HCOER 1GFASC 1FANCO 1EDIAP 1CCRUX 1DPERT 1DLINE 1DGIGA 1DCYLI 1CXAMA 1CSP1 1CSALA 1CNATA 1CHEMI 1CGRAC2 1CGRAC1 1XSP 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0065.g103.t1PF03985Paf1 InterproscanJBrowse
AALATAala_g2110.t1PF03985Paf1 InterproscanJBrowse
AAURI1scaffold231.g12.t1PF03985Paf1 InterproscanJBrowse
AAURI2scaffold979.g5.t1PF03985Paf1 InterproscanJBrowse
AAURI2scaffold979.g6.t3PF03985Paf1 InterproscanJBrowse
AAURI2scaffold979.g6.t3PF03985Paf1 InterproscanJBrowse
AAURI2scaffold979.g6.t1PF03985Paf1 InterproscanJBrowse
AAURI2scaffold979.g6.t2PF03985Paf1 InterproscanJBrowse
AAUSTENSKKQP00000015915.1PF03985Paf1 InterproscanJBrowse
AAUSTENSKKQP00000015922.1PF03985Paf1 InterproscanJBrowse
AAUSTENSKKQP00000015900.1PF03985Paf1 InterproscanJBrowse
AAUSTENSKKQP00000015932.1PF03985Paf1 InterproscanJBrowse
AAWIaawi_s0016.g79.t1PF03985Paf1 InterproscanJBrowse
ACERVKAK2567676.1PF03985Paf1 InterproscanJBrowse
ACYTHacyt_s0004.g61.t1PF03985Paf1 InterproscanJBrowse
ADIGIg30970.t1PF03985Paf1 InterproscanJBrowse
AECHIaech_s0001.g416.t1PF03985Paf1 InterproscanJBrowse
AEQUIEGACTEQ4350006619-PAPF03985Paf1 InterproscanJBrowse
AFLORaflo_s0126.g26.t1PF03985Paf1 InterproscanJBrowse
AGEMMagem_s0032.g67.t1PF03985Paf1 InterproscanJBrowse
AHEMPAhemp_010845-T1PF03985Paf1 InterproscanJBrowse
AHYACahya_s0087.g62.t1PF03985Paf1 InterproscanJBrowse
AIDSSalvinactis_v1_g14244PF03985Paf1 InterproscanJBrowse
AINTEaint_s0034.g9.t1PF03985Paf1 InterproscanJBrowse
AINTEaint_s0034.g9.t3PF03985Paf1 InterproscanJBrowse
ALIUIgene19763.t1PF03985Paf1 InterproscanJBrowse
ALORIalor_g23095.t1PF03985Paf1 InterproscanJBrowse
AMEDIENSQPTP00000035402.1PF03985Paf1 InterproscanJBrowse
AMEDIENSQPTP00000035414.1PF03985Paf1 InterproscanJBrowse
AMEDIENSQPTP00000077464.1PF03985Paf1 InterproscanJBrowse
AMEDIENSQPTP00000077450.1PF03985Paf1 InterproscanJBrowse
AMEDIENSQPTP00000077444.1PF03985Paf1 InterproscanJBrowse
AMEDIENSQPTP00000035395.1PF03985Paf1 InterproscanJBrowse
AMICRamic_s0070.g98.t1PF03985Paf1 InterproscanJBrowse
AMILLXP_029197433.2PF03985Paf1 InterproscanJBrowse
AMILLXP_029197432.2PF03985Paf1 InterproscanJBrowse
AMURIamur_s0108.g60.t1PF03985Paf1 InterproscanJBrowse
AMURIamur_s2151.g3.t1PF03985Paf1 InterproscanJBrowse
AMYRIg1481.t2.1PF03985Paf1 InterproscanJBrowse
AMYRIBRAKERYMEP00000028596.1PF03985Paf1 InterproscanJBrowse
AMYRIBRAKERYMEP00000028595.1PF03985Paf1 InterproscanJBrowse
AMYRIg1481.t1.1PF03985Paf1 InterproscanJBrowse
ANASUanas_s0113.g61.t1PF03985Paf1 InterproscanJBrowse
APALMXP_074630525.1PF03985Paf1 InterproscanJBrowse
APOCUevm.model.Ap13.389PF03985Paf1 InterproscanJBrowse
APULCFUN_044630-T1PF03985Paf1 InterproscanJBrowse
ASELAasel_s0178.g10.t1PF03985Paf1 InterproscanJBrowse
ASP1Acti_046838-T1PF03985Paf1 InterproscanJBrowse
ASP2Actinostola_15972PF03985Paf1 InterproscanJBrowse
ASP2Actinostola_15972PF03985Paf1 InterproscanJBrowse
ASP34_ENSDKXP00000014270.1PF03985Paf1 InterproscanJBrowse
ASPATENSEWQP00005033121.1PF03985Paf1 InterproscanJBrowse
ASPATENSEWQP00005033111.1PF03985Paf1 InterproscanJBrowse
ASPATENSEWQP00005033127.1PF03985Paf1 InterproscanJBrowse
ATENEXP_031559895.1PF03985Paf1 InterproscanJBrowse
ATENUaten_s0052.g24.t1PF03985Paf1 InterproscanJBrowse
AXANTENSOJPP00000026950.1PF03985Paf1 InterproscanJBrowse
AXANTENSOJPP00000026961.1PF03985Paf1 InterproscanJBrowse
AYONGayon_s0059.g147.t1PF03985Paf1 InterproscanJBrowse
BCFMM_g3807.t1PF03985Paf1 InterproscanJBrowse
BWELLBRAKERLUSP00000021455.1PF03985Paf1 InterproscanJBrowse
BWELLg7395.t1.1PF03985Paf1 InterproscanJBrowse
BWELLBRAKERLUSP00000021456.1PF03985Paf1 InterproscanJBrowse
BWELLg7395.t2.1PF03985Paf1 InterproscanJBrowse
CCOCKENSQNNP00000011485.1PF03985Paf1 InterproscanJBrowse
CCRUXg720.t1PF03985Paf1 InterproscanJBrowse
CGIGAENSKFPP00000029577.1PF03985Paf1 InterproscanJBrowse
CGIGAENSKFPP00000029584.1PF03985Paf1 InterproscanJBrowse
CGRAC1ENSFVQP00000026933.1PF03985Paf1 InterproscanJBrowse
CGRAC2BRAKERTYJP00000009957.1PF03985Paf1 InterproscanJBrowse
CHEMIXP_066928536.1PF03985Paf1 InterproscanJBrowse
CJARDENSAVKP00000029880.1PF03985Paf1 InterproscanJBrowse
CJARDENSAVKP00000029872.1PF03985Paf1 InterproscanJBrowse
CMOSAENSSJYP00000015558.1PF03985Paf1 InterproscanJBrowse
CMOSAENSSJYP00000015575.1PF03985Paf1 InterproscanJBrowse
CNATAFUN_023054-T1PF03985Paf1 InterproscanJBrowse
CQUINevm.model.HiC_scaffold_368.23PF03985Paf1 InterproscanJBrowse
CQUINevm.model.HiC_scaffold_123.48PF03985Paf1 InterproscanJBrowse
CQUINevm.model.HiC_scaffold_366.4PF03985Paf1 InterproscanJBrowse
CSALAENSOFVP00000025986.1PF03985Paf1 InterproscanJBrowse
CSP1Csp0G212780PF03985Paf1 InterproscanJBrowse
CSP2P_ENSNWCP00000016167.1PF03985Paf1 InterproscanJBrowse
CSP2P_ENSNWCP00000016190.1PF03985Paf1 InterproscanJBrowse
CSP2P_ENSNWCP00000016175.1PF03985Paf1 InterproscanJBrowse
CXAMACxam_g7692.t1PF03985Paf1 InterproscanJBrowse
DAXIFENSXFYP00000032475.1PF03985Paf1 InterproscanJBrowse
DAXIFENSXFYP00000032488.1PF03985Paf1 InterproscanJBrowse
DCRIBg18685.t1.1PF03985Paf1 InterproscanJBrowse
DCRIBBRAKERRLHP00000025518.1PF03985Paf1 InterproscanJBrowse
DCYLIFUN_019699-T1PF03985Paf1 InterproscanJBrowse
DGIGAXP_028398779.1PF03985Paf1 InterproscanJBrowse
DLINEENSDLIP00000024661.1PF03985Paf1 InterproscanJBrowse
DPERTKAJ7379997.1PF03985Paf1 InterproscanJBrowse
ECAVOENSLDHP00000009618.1PF03985Paf1 InterproscanJBrowse
ECAVOENSLDHP00000009634.1PF03985Paf1 InterproscanJBrowse
ECAVOENSLDHP00000009630.1PF03985Paf1 InterproscanJBrowse
EDIAPKXJ17742.1PF03985Paf1 InterproscanJBrowse
EHORRENSJVNP00000040404.1PF03985Paf1 InterproscanJBrowse
EVERRENSNOVP00005042172.1PF03985Paf1 InterproscanJBrowse
EVERRENSNOVP00005042179.1PF03985Paf1 InterproscanJBrowse
FANCOeanc_s001.g0017.t1PF03985Paf1 InterproscanJBrowse
GFASCgfas1.m1.9947.m1PF03985Paf1 InterproscanJBrowse
HCOERENSBQFP00000032953.1PF03985Paf1 InterproscanJBrowse
HECHIENSDJXP00000023264.1PF03985Paf1 InterproscanJBrowse
HIMPEevm.model.Chr09.953PF03985Paf1 InterproscanJBrowse
HIMPEevm.model.Chr09.953PF03985Paf1 InterproscanJBrowse
HOCTOg3643.t1.1PF03985Paf1 InterproscanJBrowse
HOCTOBRAKERHOCP00005006747.1PF03985Paf1 InterproscanJBrowse
HOLIGHOLI02135.G29541PF03985Paf1 InterproscanJBrowse
HOLIGHOLI01977.G47394PF03985Paf1 InterproscanJBrowse
HOLIGHOLI01977.G47395PF03985Paf1 InterproscanJBrowse
HSALMKAF0988490.1PF03985Paf1 InterproscanJBrowse
HSYMBHSymV2.0_g09.14966_t1PF03985Paf1 InterproscanJBrowse
HVIRIg22480.t1.1PF03985Paf1 InterproscanJBrowse
HVIRIBRAKERKREP00000000711.1PF03985Paf1 InterproscanJBrowse
HVULGXP_065661697.1PF03985Paf1 InterproscanJBrowse
HVULGXP_065661698.1PF03985Paf1 InterproscanJBrowse
LPERTOS493_012759-T1PF03985Paf1 InterproscanJBrowse
LSARMENSAPQP00000033691.1PF03985Paf1 InterproscanJBrowse
LSARMENSAPQP00000033708.1PF03985Paf1 InterproscanJBrowse
MAUREENSIHXP00000025985.1PF03985Paf1 InterproscanJBrowse
MAUREENSIHXP00000025962.1PF03985Paf1 InterproscanJBrowse
MAUREENSIHXP00000025962.1PF03985Paf1 InterproscanJBrowse
MCACTg50714.t1.1PF03985Paf1 InterproscanJBrowse
MCACTBRAKERNUSP00000054945.1PF03985Paf1 InterproscanJBrowse
MCACTBRAKERNUSP00000054944.1PF03985Paf1 InterproscanJBrowse
MCACTg50714.t2.1PF03985Paf1 InterproscanJBrowse
MCAPIg9291.t1PF03985Paf1 InterproscanJBrowse
MCAPRXP_068731308.1PF03985Paf1 InterproscanJBrowse
MCOMPENSODKP00000034952.1PF03985Paf1 InterproscanJBrowse
MEFFLENSTIFP00000013032.1PF03985Paf1 InterproscanJBrowse
MFOLIXP_068681410.1PF03985Paf1 InterproscanJBrowse
MFOLIXP_068681411.1PF03985Paf1 InterproscanJBrowse
MHONGEVM0009043.1PF03985Paf1 InterproscanJBrowse
MLORDENSSYXP00000019523.1PF03985Paf1 InterproscanJBrowse
MLORDENSSYXP00000019515.1PF03985Paf1 InterproscanJBrowse
MMEANENSVBPP00000010095.1PF03985Paf1 InterproscanJBrowse
MMURIBRAKERXEIP00000046045.1PF03985Paf1 InterproscanJBrowse
MPAPUBRAKERKYLP00000018142.1PF03985Paf1 InterproscanJBrowse
MSENAENSVTRP00000025070.1PF03985Paf1 InterproscanJBrowse
MSENAENSVTRP00000025046.1PF03985Paf1 InterproscanJBrowse
MSENAENSVTRP00000025046.1PF03985Paf1 InterproscanJBrowse
MSENAENSVTRP00000025058.1PF03985Paf1 InterproscanJBrowse
MSENAENSVTRP00000025058.1PF03985Paf1 InterproscanJBrowse
MSENIENSDTNP00000023995.1PF03985Paf1 InterproscanJBrowse
MVIRUscaffold104.g38.t1PF03985Paf1 InterproscanJBrowse
NNOMUg10969.t1.1PF03985Paf1 InterproscanJBrowse
NNOMUBRAKERMNPP00000007742.1PF03985Paf1 InterproscanJBrowse
NSEPTANN22949-RAPF03985Paf1 InterproscanJBrowse
NSEPTANN22949-RAPF03985Paf1 InterproscanJBrowse
NVECTXP_048586135.1PF03985Paf1 InterproscanJBrowse
OARBUENSPTBP00000032189.1PF03985Paf1 InterproscanJBrowse
OARBUENSPTBP00000032180.1PF03985Paf1 InterproscanJBrowse
OFAVEXP_020618250.1PF03985Paf1 InterproscanJBrowse
OFRANXP_081318762.1PF03985Paf1 InterproscanJBrowse
OPATAKAL9952382.1PF03985Paf1 InterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g14127.t1PF03985Paf1 InterproscanJBrowse
PAUSTpaus_s1929.g1.t1PF03985Paf1 InterproscanJBrowse
PCLAVCAB3980556.1PF03985Paf1 InterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g1760.t1PF03985Paf1 InterproscanJBrowse
PCRUSPcrG017525.mRNA1PF03985Paf1 InterproscanJBrowse
PCYLIENSZOFP00000030998.1PF03985Paf1 InterproscanJBrowse
PDAMIRMX40894.1PF03985Paf1 InterproscanJBrowse
PDAMIRMX40894.1PF03985Paf1 InterproscanJBrowse
PDIVAENSHHBP00000003350.1PF03985Paf1 InterproscanJBrowse
PEVERCAH3030477.1PF03985Paf1 InterproscanJBrowse
PEVERCAH3188411.1PF03985Paf1 InterproscanJBrowse
PGRISENSPYFP00000008825.1PF03985Paf1 InterproscanJBrowse
PGRISENSPYFP00000008808.1PF03985Paf1 InterproscanJBrowse
PHARRKAM7446466.1PF03985Paf1 InterproscanJBrowse
PLOBAENSNQRP00000007113.1PF03985Paf1 InterproscanJBrowse
PLOBAENSNQRP00000007101.1PF03985Paf1 InterproscanJBrowse
PLOBAENSNQRP00000007124.1PF03985Paf1 InterproscanJBrowse
PLUTEXP_073250184.1PF03985Paf1 InterproscanJBrowse
PMEANCAH3043583.1PF03985Paf1 InterproscanJBrowse
PMIZIc0328.g023.t1.p1PF03985Paf1 InterproscanJBrowse
PNOCTENSXLYP00000000845.1PF03985Paf1 InterproscanJBrowse
PNOCTENSXLYP00000000858.1PF03985Paf1 InterproscanJBrowse
PPAPIPpa0G013910PF03985Paf1 InterproscanJBrowse
PPENNENSDKPP00000040573.1PF03985Paf1 InterproscanJBrowse
PPENNENSDKPP00000040580.1PF03985Paf1 InterproscanJBrowse
PRUSENSGYQP00005036123.1PF03985Paf1 InterproscanJBrowse
PRUSENSGYQP00005036134.1PF03985Paf1 InterproscanJBrowse
PSINE1g12956.t1PF03985Paf1 InterproscanJBrowse
PSINE2evm.model.contig_36653.6PF03985Paf1 InterproscanJBrowse
PSINE2evm.model.contig_66968.1PF03985Paf1 InterproscanJBrowse
PSPECpspe_0.1.m1.62011.m1PF03985Paf1 InterproscanJBrowse
PUMBRc1307.g003.t1PF03985Paf1 InterproscanJBrowse
PVERRXP_058952231.1PF03985Paf1 InterproscanJBrowse
PXISHHK74SY85_g25549PF03985Paf1 InterproscanJBrowse
RESCUXP_065067815.1PF03985Paf1 InterproscanJBrowse
RFLORENSORFP00005000597.1PF03985Paf1 InterproscanJBrowse
ROSCUENSJQFP00000024867.1PF03985Paf1 InterproscanJBrowse
ROSCUENSJQFP00000024856.1PF03985Paf1 InterproscanJBrowse
SCALLNY_Scal100_v1.12944.1PF03985Paf1 InterproscanJBrowse
SCALLNY_Scal100_v1.28650.1PF03985Paf1 InterproscanJBrowse
SINTEENSDDJP00000038614.1PF03985Paf1 InterproscanJBrowse
SINTEENSDDJP00000038628.1PF03985Paf1 InterproscanJBrowse
SMALAENSXQXP00000032213.1PF03985Paf1 InterproscanJBrowse
SMALAENSXQXP00000032217.1PF03985Paf1 InterproscanJBrowse
SPISTPFX27167.1PF03985Paf1 InterproscanJBrowse
SRADIENSTHXP00000051820.1PF03985Paf1 InterproscanJBrowse
SRADIENSTHXP00000051831.1PF03985Paf1 InterproscanJBrowse
SSIDEFUN_009440-T1PF03985Paf1 InterproscanJBrowse
TCOCCTcoG009435.mRNA1PF03985Paf1 InterproscanJBrowse
TDOHRTur_r2.0_p0006.1.g45490.t1PF03985Paf1 InterproscanJBrowse
TKITAKII66860.1PF03985Paf1 InterproscanJBrowse
TMAIPg425.t1PF03985Paf1 InterproscanJBrowse
TRENIENSHNZP00000024673.1PF03985Paf1 InterproscanJBrowse
TRENIENSHNZP00000024673.1PF03985Paf1 InterproscanJBrowse
TRENIENSHNZP00000024680.1PF03985Paf1 InterproscanJBrowse
TRUBRBRAKERIOWP00000005851.1PF03985Paf1 InterproscanJBrowse
TRUBRg20164.t1.1PF03985Paf1 InterproscanJBrowse
TSTEPBRAKERFUXP00000025401.1PF03985Paf1 InterproscanJBrowse
XSPXP_046849185.1PF03985Paf1 InterproscanJBrowse

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