Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 193 gene–annotation pairs matching PF08231 across 148 genomes · 7423 ms.

Species with hits:MCACT 4LSARM 4AMEDI 4AGEMM 3SINTE 3EVERR 3PCLAV 3XSP 2MLORD 2LPERT 2HOLIG 2HVIRI 2HOCTO 2HCOER 2DPERT 2DCRIB 2CNATA 2MMEAN 2NVECT 2NNOMU 2BWELL 2OFAVE 2OFRAN 2PHARR 2PLOBA 2PMIZI 2PNOCT 2PRUS 2PSPEC 2RFLOR 2TCOCC 2TRUBR 2CGRAC1 2HVULG 2AXANT 2AMILL 2AAUST 2ALORI 2ASPAT 2AMYRI 2PCRUS 1PLUTE 1AFLOR 1AHEMP 1PGRIS 1PEVER 1PDIVA 1PDAMI 1PCYLI 1PAUST 1PCOMP 1AHYAC 1AEQUI 1PACUT 1OPATA 1AIDSS 1AINTE 1OARBU 1ALIUI 1NSEPT 1MVIRU 1PMEAN 1PPAPI 1AECHI 1ACERV 1TSTEP 1TSP 1TRENI 1TMAIP 1TKITA 1TDOHR 1AAWI 1SSIDE 1SRADI 1SPIST 1SCALL 1MSENI 1ROSCU 1ACOER 1RESCU 1PXISH 1PVERR 1PUMBR 1ACYTH 1PSINE2 1PSINE1 1ADIGI 1PPENN 1MSQUA 1MMURI 1MSENA 1CSP2 1EELEG 1EDIAP 1ECAVO 1ASP2 1DLINE 1DGIGA 1DCYLI 1ASP3 1DAXIF 1CXAMA 1CSP1 1ASP1 1CSALA 1CMOSA 1CJARD 1CHEMI 1CGRAC2 1ATENE 1CGIGA 1CCRUX 1CCOCK 1ATENU 1BCFM 1EHORR 1FANCO 1MPAPU 1AMURI 1AYONG 1AMICR 1MHONG 1MGRIS 1MFOLI 1MEFFL 1MDICH 1MCOMP 1MCAPR 1MCAPI 1MAURE 1ASELA 1MALCI 1LSCAB 1ANASU 1AAURI1 1APALM 1HSYMB 1HSALM 1APOCU 1APULC 1HIMPE 1HECHI 1AACUM 1
SpeciesGene IDPfam termMatchSourceBrowser
AACUMaacu_s0039.g113.t1PF08231SYF2 splicing factorInterproscanJBrowse
AAURI1scaffold72.g36.t1PF08231SYF2 splicing factorInterproscanJBrowse
AAUSTENSKKQP00000007795.1PF08231SYF2 splicing factorInterproscanJBrowse
AAUSTENSKKQP00000007788.1PF08231SYF2 splicing factorInterproscanJBrowse
AAWIaawi_s0098.g50.t1PF08231SYF2 splicing factorInterproscanJBrowse
ACERVKAK2570618.1PF08231SYF2 splicing factorInterproscanJBrowse
ACOERevm.model.ptg000009l.20PF08231SYF2 splicing factorInterproscanJBrowse
ACYTHacyt_s0030.g23.t1PF08231SYF2 splicing factorInterproscanJBrowse
ADIGIg25194.t1PF08231SYF2 splicing factorInterproscanJBrowse
AECHIaech_s0176.g17.t1PF08231SYF2 splicing factorInterproscanJBrowse
AEQUIEGACTEQ4350010193-PAPF08231SYF2 splicing factorInterproscanJBrowse
AFLORaflo_s0148.g32.t1PF08231SYF2 splicing factorInterproscanJBrowse
AGEMMagem_s0079.g20.t1PF08231SYF2 splicing factorInterproscanJBrowse
AGEMMagem_s0079.g20.t2PF08231SYF2 splicing factorInterproscanJBrowse
AGEMMagem_s0079.g20.t2PF08231SYF2 splicing factorInterproscanJBrowse
AHEMPAhemp_001850-T1PF08231SYF2 splicing factorInterproscanJBrowse
AHYACahya_s0129.g41.t1PF08231SYF2 splicing factorInterproscanJBrowse
AIDSSalvinactis_v1_g5063PF08231SYF2 splicing factorInterproscanJBrowse
AINTEaint_s0009.g32.t1PF08231SYF2 splicing factorInterproscanJBrowse
ALIUIgene29939.t1PF08231SYF2 splicing factorInterproscanJBrowse
ALORIalor_g6728.t2PF08231SYF2 splicing factorInterproscanJBrowse
ALORIalor_g6728.t1PF08231SYF2 splicing factorInterproscanJBrowse
AMEDIENSQPTP00000055853.1PF08231SYF2 splicing factorInterproscanJBrowse
AMEDIENSQPTP00000015950.1PF08231SYF2 splicing factorInterproscanJBrowse
AMEDIENSQPTP00000015966.1PF08231SYF2 splicing factorInterproscanJBrowse
AMEDIENSQPTP00000055866.1PF08231SYF2 splicing factorInterproscanJBrowse
AMICRamic_s0169.g79.t1PF08231SYF2 splicing factorInterproscanJBrowse
AMILLXP_044177820.1PF08231SYF2 splicing factorInterproscanJBrowse
AMILLXP_044177821.1PF08231SYF2 splicing factorInterproscanJBrowse
AMURIamur_s0014.g19.t1PF08231SYF2 splicing factorInterproscanJBrowse
AMYRIBRAKERYMEP00000004657.1PF08231SYF2 splicing factorInterproscanJBrowse
AMYRIg15097.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
ANASUanas_s0181.g6.t1PF08231SYF2 splicing factorInterproscanJBrowse
APALMXP_074624781.1PF08231SYF2 splicing factorInterproscanJBrowse
APOCUevm.model.Ap6.2303PF08231SYF2 splicing factorInterproscanJBrowse
APULCFUN_011932-T1PF08231SYF2 splicing factorInterproscanJBrowse
ASELAasel_s0044.g62.t1PF08231SYF2 splicing factorInterproscanJBrowse
ASP1Acti_028927-T1PF08231SYF2 splicing factorInterproscanJBrowse
ASP2Actinostola_11325PF08231SYF2 splicing factorInterproscanJBrowse
ASP34_ENSDKXP00000006548.1PF08231SYF2 splicing factorInterproscanJBrowse
ASPATENSEWQP00005014467.1PF08231SYF2 splicing factorInterproscanJBrowse
ASPATENSEWQP00005014475.1PF08231SYF2 splicing factorInterproscanJBrowse
ATENEXP_031568168.1PF08231SYF2 splicing factorInterproscanJBrowse
ATENUaten_s0002.g211.t1PF08231SYF2 splicing factorInterproscanJBrowse
AXANTENSOJPP00000009256.1PF08231SYF2 splicing factorInterproscanJBrowse
AXANTENSOJPP00000009261.1PF08231SYF2 splicing factorInterproscanJBrowse
AYONGayon_s0036.g108.t1PF08231SYF2 splicing factorInterproscanJBrowse
BCFMM_g20976.t1PF08231SYF2 splicing factorInterproscanJBrowse
BWELLBRAKERLUSP00000019248.1PF08231SYF2 splicing factorInterproscanJBrowse
BWELLg30301.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
CCOCKENSQNNP00000018672.1PF08231SYF2 splicing factorInterproscanJBrowse
CCRUXg861.t1PF08231SYF2 splicing factorInterproscanJBrowse
CGIGAENSKFPP00000027800.1PF08231SYF2 splicing factorInterproscanJBrowse
CGRAC1ENSFVQP00000008363.1PF08231SYF2 splicing factorInterproscanJBrowse
CGRAC1ENSFVQP00000008371.1PF08231SYF2 splicing factorInterproscanJBrowse
CGRAC2BRAKERTYJP00000020275.1PF08231SYF2 splicing factorInterproscanJBrowse
CHEMIXP_066921640.1PF08231SYF2 splicing factorInterproscanJBrowse
CJARDENSAVKP00000026999.1PF08231SYF2 splicing factorInterproscanJBrowse
CMOSAENSSJYP00000012333.1PF08231SYF2 splicing factorInterproscanJBrowse
CNATAFUN_013923-T1PF08231SYF2 splicing factorInterproscanJBrowse
CNATAFUN_013923-T2PF08231SYF2 splicing factorInterproscanJBrowse
CSALAENSOFVP00000026643.1PF08231SYF2 splicing factorInterproscanJBrowse
CSP1Csp0G070290PF08231SYF2 splicing factorInterproscanJBrowse
CSP2P_ENSNWCP00000008282.1PF08231SYF2 splicing factorInterproscanJBrowse
CXAMACxam_g25170.t1PF08231SYF2 splicing factorInterproscanJBrowse
DAXIFENSXFYP00000035514.1PF08231SYF2 splicing factorInterproscanJBrowse
DCRIBg13047.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
DCRIBBRAKERRLHP00000016368.1PF08231SYF2 splicing factorInterproscanJBrowse
DCYLIFUN_018963-T1PF08231SYF2 splicing factorInterproscanJBrowse
DGIGAXP_028411281.1PF08231SYF2 splicing factorInterproscanJBrowse
DLINEENSDLIP00000014050.1PF08231SYF2 splicing factorInterproscanJBrowse
DPERTKAJ7391341.1PF08231SYF2 splicing factorInterproscanJBrowse
DPERTKAJ7315085.1PF08231SYF2 splicing factorInterproscanJBrowse
ECAVOENSLDHP00000041694.1PF08231SYF2 splicing factorInterproscanJBrowse
EDIAPKXJ04233.1PF08231SYF2 splicing factorInterproscanJBrowse
EELEGjg6215.t1PF08231SYF2 splicing factorInterproscanJBrowse
EHORRENSJVNP00000041493.1PF08231SYF2 splicing factorInterproscanJBrowse
EVERRENSNOVP00005028584.1PF08231SYF2 splicing factorInterproscanJBrowse
EVERRENSNOVP00005028568.1PF08231SYF2 splicing factorInterproscanJBrowse
EVERRENSNOVP00005028575.1PF08231SYF2 splicing factorInterproscanJBrowse
FANCOeanc_s101.g0029.t1PF08231SYF2 splicing factorInterproscanJBrowse
HCOERENSBQFP00000011469.1PF08231SYF2 splicing factorInterproscanJBrowse
HCOERENSBQFP00000011461.1PF08231SYF2 splicing factorInterproscanJBrowse
HECHIENSDJXP00000025144.1PF08231SYF2 splicing factorInterproscanJBrowse
HIMPEevm.model.Chr10.352PF08231SYF2 splicing factorInterproscanJBrowse
HOCTOBRAKERHOCP00005014791.1PF08231SYF2 splicing factorInterproscanJBrowse
HOCTOg16912.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
HOLIGHOLI00644.G54407PF08231SYF2 splicing factorInterproscanJBrowse
HOLIGHOLI00644.G54405PF08231SYF2 splicing factorInterproscanJBrowse
HSALMKAF0986286.1PF08231SYF2 splicing factorInterproscanJBrowse
HSYMBHSymV2.0_g05.08139_t1PF08231SYF2 splicing factorInterproscanJBrowse
HVIRIg2859.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
HVIRIBRAKERKREP00000016876.1PF08231SYF2 splicing factorInterproscanJBrowse
HVULGXP_065653494.1PF08231SYF2 splicing factorInterproscanJBrowse
HVULGXP_065653493.1PF08231SYF2 splicing factorInterproscanJBrowse
LPERTOS493_018384-T1PF08231SYF2 splicing factorInterproscanJBrowse
LPERTOS493_038931-T1PF08231SYF2 splicing factorInterproscanJBrowse
LSARMENSAPQP00000032708.1PF08231SYF2 splicing factorInterproscanJBrowse
LSARMENSAPQP00000021913.1PF08231SYF2 splicing factorInterproscanJBrowse
LSARMENSAPQP00000032715.1PF08231SYF2 splicing factorInterproscanJBrowse
LSARMENSAPQP00000021908.1PF08231SYF2 splicing factorInterproscanJBrowse
LSCABANN10627-RAPF08231SYF2 splicing factorInterproscanJBrowse
MALCIENSCIQP00000013139.1PF08231SYF2 splicing factorInterproscanJBrowse
MAUREENSIHXP00000033657.1PF08231SYF2 splicing factorInterproscanJBrowse
MCACT23445_t.1PF08231SYF2 splicing factorInterproscanJBrowse
MCACTBRAKERNUSP00000023614.1PF08231SYF2 splicing factorInterproscanJBrowse
MCACTBRAKERNUSP00000023597.1PF08231SYF2 splicing factorInterproscanJBrowse
MCACTg35860.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
MCAPIg7423.t1PF08231SYF2 splicing factorInterproscanJBrowse
MCAPRXP_068755295.1PF08231SYF2 splicing factorInterproscanJBrowse
MCOMPENSODKP00000018652.1PF08231SYF2 splicing factorInterproscanJBrowse
MDICHENSYDOP00000017831.1PF08231SYF2 splicing factorInterproscanJBrowse
MEFFLENSTIFP00000026748.1PF08231SYF2 splicing factorInterproscanJBrowse
MFOLIXP_068698665.1PF08231SYF2 splicing factorInterproscanJBrowse
MGRISANN31707-RAPF08231SYF2 splicing factorInterproscanJBrowse
MHONGEVM0014337.1PF08231SYF2 splicing factorInterproscanJBrowse
MLORDENSSYXP00000013972.1PF08231SYF2 splicing factorInterproscanJBrowse
MLORDENSSYXP00000013955.1PF08231SYF2 splicing factorInterproscanJBrowse
MMEANENSVBPP00000022123.1PF08231SYF2 splicing factorInterproscanJBrowse
MMEANENSVBPP00000022131.1PF08231SYF2 splicing factorInterproscanJBrowse
MMURIBRAKERXEIP00000049261.1PF08231SYF2 splicing factorInterproscanJBrowse
MPAPUBRAKERKYLP00000002346.1PF08231SYF2 splicing factorInterproscanJBrowse
MSENAENSVTRP00000028165.1PF08231SYF2 splicing factorInterproscanJBrowse
MSENIENSDTNP00000011635.1PF08231SYF2 splicing factorInterproscanJBrowse
MSQUAKAF1741109.1PF08231SYF2 splicing factorInterproscanJBrowse
MVIRUscaffold109.g54.t1PF08231SYF2 splicing factorInterproscanJBrowse
NNOMUBRAKERMNPP00000005241.1PF08231SYF2 splicing factorInterproscanJBrowse
NNOMUg9126.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
NSEPTANN18703-RAPF08231SYF2 splicing factorInterproscanJBrowse
NVECTXP_032234825.2PF08231SYF2 splicing factorInterproscanJBrowse
NVECTXP_001630374.3PF08231SYF2 splicing factorInterproscanJBrowse
OARBUENSPTBP00000027209.1PF08231SYF2 splicing factorInterproscanJBrowse
OFAVEXP_020622031.1PF08231SYF2 splicing factorInterproscanJBrowse
OFAVEXP_020622032.1PF08231SYF2 splicing factorInterproscanJBrowse
OFRANXP_081316208.1PF08231SYF2 splicing factorInterproscanJBrowse
OFRANXP_081316209.1PF08231SYF2 splicing factorInterproscanJBrowse
OPATAKAL9969493.1PF08231SYF2 splicing factorInterproscanJBrowse
PACUTPocillopora_acuta_HIv2___RNAseq.g18431.t1PF08231SYF2 splicing factorInterproscanJBrowse
PAUSTpaus_s0101.g31.t1PF08231SYF2 splicing factorInterproscanJBrowse
PCLAVCAB3980877.1PF08231SYF2 splicing factorInterproscanJBrowse
PCLAVCAB3980878.1PF08231SYF2 splicing factorInterproscanJBrowse
PCLAVCAB3980879.1PF08231SYF2 splicing factorInterproscanJBrowse
PCOMPPorites_compressa_HIv1___RNAseq.g32590.t1PF08231SYF2 splicing factorInterproscanJBrowse
PCRUSPcrG021221.mRNA1PF08231SYF2 splicing factorInterproscanJBrowse
PCYLIENSZOFP00000003063.1PF08231SYF2 splicing factorInterproscanJBrowse
PDAMIRMX39710.1PF08231SYF2 splicing factorInterproscanJBrowse
PDIVAENSHHBP00000014703.1PF08231SYF2 splicing factorInterproscanJBrowse
PEVERCAH3036006.1PF08231SYF2 splicing factorInterproscanJBrowse
PGRISENSPYFP00000032628.1PF08231SYF2 splicing factorInterproscanJBrowse
PHARRKAM7447837.1PF08231SYF2 splicing factorInterproscanJBrowse
PHARRKAM7447836.1PF08231SYF2 splicing factorInterproscanJBrowse
PLOBAENSNQRP00000030738.1PF08231SYF2 splicing factorInterproscanJBrowse
PLOBAENSNQRP00000030729.1PF08231SYF2 splicing factorInterproscanJBrowse
PLUTEXP_073227966.1PF08231SYF2 splicing factorInterproscanJBrowse
PMEANCAH3035307.1PF08231SYF2 splicing factorInterproscanJBrowse
PMIZIc1830.g001.t1.p1PF08231SYF2 splicing factorInterproscanJBrowse
PMIZIc0384.g006.t1.p1PF08231SYF2 splicing factorInterproscanJBrowse
PNOCTENSXLYP00000029130.1PF08231SYF2 splicing factorInterproscanJBrowse
PNOCTENSXLYP00000029126.1PF08231SYF2 splicing factorInterproscanJBrowse
PPAPIPpa0G344070PF08231SYF2 splicing factorInterproscanJBrowse
PPENNENSDKPP00000002658.1PF08231SYF2 splicing factorInterproscanJBrowse
PRUSENSGYQP00005000981.1PF08231SYF2 splicing factorInterproscanJBrowse
PRUSENSGYQP00005000968.1PF08231SYF2 splicing factorInterproscanJBrowse
PSINE1g16168.t1PF08231SYF2 splicing factorInterproscanJBrowse
PSINE2evm.model.contig_15990.2PF08231SYF2 splicing factorInterproscanJBrowse
PSPECpspe_0.1.m1.57693.m1PF08231SYF2 splicing factorInterproscanJBrowse
PSPECpspe_0.1.m1.64284.m1PF08231SYF2 splicing factorInterproscanJBrowse
PUMBRc1468.g003.t1PF08231SYF2 splicing factorInterproscanJBrowse
PVERRXP_058952994.2PF08231SYF2 splicing factorInterproscanJBrowse
PXISHHK74SY85_g4121PF08231SYF2 splicing factorInterproscanJBrowse
RESCUXP_065056960.1PF08231SYF2 splicing factorInterproscanJBrowse
RFLORENSORFP00005029565.1PF08231SYF2 splicing factorInterproscanJBrowse
RFLORENSORFP00005002598.1PF08231SYF2 splicing factorInterproscanJBrowse
ROSCUENSJQFP00000013251.1PF08231SYF2 splicing factorInterproscanJBrowse
SCALLNY_Scal100_v1.30878.1PF08231SYF2 splicing factorInterproscanJBrowse
SINTEENSDDJP00000033560.1PF08231SYF2 splicing factorInterproscanJBrowse
SINTEENSDDJP00000033543.1PF08231SYF2 splicing factorInterproscanJBrowse
SINTEENSDDJP00000033566.1PF08231SYF2 splicing factorInterproscanJBrowse
SPISTPFX33763.1PF08231SYF2 splicing factorInterproscanJBrowse
SRADIENSTHXP00000009103.1PF08231SYF2 splicing factorInterproscanJBrowse
SSIDEFUN_053285-T1PF08231SYF2 splicing factorInterproscanJBrowse
TCOCCTcoG034778.mRNA1PF08231SYF2 splicing factorInterproscanJBrowse
TCOCCTcoG036925.mRNA1PF08231SYF2 splicing factorInterproscanJBrowse
TDOHRTur_r2.0_p0133.1.g52109.t1PF08231SYF2 splicing factorInterproscanJBrowse
TKITAKII73509.1PF08231SYF2 splicing factorInterproscanJBrowse
TMAIPg5083.t1PF08231SYF2 splicing factorInterproscanJBrowse
TRENIENSHNZP00000017861.1PF08231SYF2 splicing factorInterproscanJBrowse
TRUBRg11984.t1.1PF08231SYF2 splicing factorInterproscanJBrowse
TRUBRBRAKERIOWP00000003530.1PF08231SYF2 splicing factorInterproscanJBrowse
TSPClavulariidae_g2328PF08231SYF2 splicing factorInterproscanJBrowse
TSTEPBRAKERFUXP00000043755.1PF08231SYF2 splicing factorInterproscanJBrowse
XSPXP_046849570.1PF08231SYF2 splicing factorInterproscanJBrowse
XSPXP_046849569.1PF08231SYF2 splicing factorInterproscanJBrowse

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